RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 GFERP55789 205 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 PLAURQ03405 335 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 KRR1Q13601 381 aaKnown RBP12.91□□□□□ -0.34
LDB3-204ENST00000372066 ULK3Q6PHR2 472 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 SMARCD3Q6STE5 483 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 ZAR1Q86SH2 424 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 KMT5CQ86Y97 462 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 PLXDC1Q8IUK5 500 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 AHCYL2Q96HN2 611 aaKnown RBP12.91□□□□□ -0.34
LDB3-204ENST00000372066 CNPPD1Q9BV87 410 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 OR10A5Q9H207 317 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 CMC2Q9NRP2 79 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 SEMA5BQ9P283 1151 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 RPS6KB2Q9UBS0 482 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 CBLCQ9ULV8 474 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 SIGLEC7Q9Y286 467 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 SPIN1Q9Y657 262 aaPredicted RBP12.91□□□□□ -0.34
LDB3-204ENST00000372066 IQCMA0A1B0GVH7 501 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 SLC22A31A6NKX4 558 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 POLR1CO15160 346 aaPredicted RBP12.9□□□□□ -0.34
LDB3-204ENST00000372066 PPM1BO75688 479 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 ZGLP1P0C6A0 271 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 TBXA2RP21731 343 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 ADH7P40394 386 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 RPS3AP61247 264 aaKnown RBP12.9□□□□□ -0.34
LDB3-204ENST00000372066 GPLD1P80108 840 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 HSD11B2P80365 405 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 RUNX1T1Q06455 604 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 TRA2AQ13595 282 aaKnown RBP eCLIP12.9□□□□□ -0.34
LDB3-204ENST00000372066 SPANXN2Q5MJ10 180 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 LIPKQ5VXJ0 399 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 NIPAL3Q6P499 406 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 ARHGAP11AQ6P4F7 1023 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 PAQR6Q6TCH4 344 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 NPSR1Q6W5P4 371 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 LINC00114Q6XXX2 140 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 HSDL2Q6YN16 418 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 BTLAQ7Z6A9 289 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 IL22RA1Q8N6P7 574 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 ZNF614Q8N883 585 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 ZNF615Q8N8J6 731 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 ZNF485Q8NCK3 441 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 AGBL5Q8NDL9 886 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 OR4D9Q8NGE8 314 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 PFN4Q8NHR9 129 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 C16orf52Q8NHV5 167 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 RNF217Q8TC41 542 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 DNAJA4Q8WW22 397 aaPredicted RBP12.9□□□□□ -0.34
LDB3-204ENST00000372066 NKD1Q969G9 470 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 RNF167Q9H6Y7 350 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 SP140LQ9H930 580 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 HINT3Q9NQE9 182 aaKnown RBP12.9□□□□□ -0.34
LDB3-204ENST00000372066 CUTCQ9NTM9 273 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 MRTO4Q9UKD2 239 aaKnown RBP12.9□□□□□ -0.34
LDB3-204ENST00000372066 ERVK-19Q9WJR5 959 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 GSTK1Q9Y2Q3 226 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 CAB39Q9Y376 341 aaPredicted RBP12.9□□□□□ -0.34
LDB3-204ENST00000372066 OR10H1Q9Y4A9 318 aa12.9□□□□□ -0.34
LDB3-204ENST00000372066 MN1Q10571 1320 aaPredicted RBP12.9□□□□□ -0.34
LDB3-204ENST00000372066 IGHV1OR21-1A0A087WYE8 117 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 RIIAD1A6NNX1 92 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 TERTO14746 1132 aaKnown RBP12.9□□□□□ -0.35
LDB3-204ENST00000372066 MAGEB3O15480 346 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 NTN1O95631 604 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 CH25HO95992 272 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 IGF2P01344 180 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 IGKV1D-16P01601 117 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 IFNA16P05015 189 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 CT45A8P0DMV1 189 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 CT45A9P0DMV2 189 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 SAGP10523 405 aaPredicted RBP12.9□□□□□ -0.35
LDB3-204ENST00000372066 FGF9P31371 208 aaPredicted RBP12.9□□□□□ -0.35
LDB3-204ENST00000372066 SLC6A6P31641 620 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 SLC9A3P48764 834 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 ARL4DP49703 201 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 FXYD6P3P58550 94 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 MAT1AQ00266 395 aaKnown RBP12.9□□□□□ -0.35
LDB3-204ENST00000372066 DOC2BQ14184 412 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 CT45A2Q5DJT8 189 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 ALG10BQ5I7T1 473 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 CD200R1LQ6Q8B3 271 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 TMPRSS11AQ6ZMR5 421 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 PLEKHG7Q6ZR37 379 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 QSOX2Q6ZRP7 698 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 MEPCEQ7L2J0 689 aaKnown RBP12.9□□□□□ -0.35
LDB3-204ENST00000372066 CPOQ8IVL8 374 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 SHISA5Q8N114 240 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 ZNF527Q8NB42 609 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 SLC2A12Q8TD20 617 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 PMEPA1Q969W9 287 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 CEP19Q96LK0 163 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 WDFY2Q96P53 400 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 DPYSL5Q9BPU6 564 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 SLC19A3Q9BZV2 496 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 SLC25A18Q9H1K4 315 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 MKKSQ9NPJ1 570 aaPredicted RBP12.9□□□□□ -0.35
LDB3-204ENST00000372066 C20orf141Q9NUB4 165 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 TXNL4BQ9NX01 149 aaKnown RBP12.9□□□□□ -0.35
LDB3-204ENST00000372066 SLC39A1Q9NY26 324 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms