RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 GMEB1Q9Y692 573 aa11.05□□□□□ -0.64
MRPL55-209ENST00000366735 PRR14LQ5THK1 2151 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 PRORSD1PA6NEY8 169 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 NME4O00746 187 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 ACOT8O14734 319 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 CLOCKO15516 846 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 TLX2O43763 284 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-209ENST00000366735 KCNK2O95069 426 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 ATP6V1G2O95670 118 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 PLAUP00749 431 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 ADH6P28332 368 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 SFTPDP35247 375 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 MAP3K8P41279 467 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 POU6F2P78424 691 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-209ENST00000366735 TRAP1Q12931 704 aaKnown RBP11.04□□□□□ -0.64
MRPL55-209ENST00000366735 TNK1Q13470 666 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 TRIM25Q14258 630 aaKnown RBP11.04□□□□□ -0.64
MRPL55-209ENST00000366735 FXNQ16595 210 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 PRSS53Q2L4Q9 553 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 PGS1Q32NB8 556 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 OR4F3Q6IEY1 312 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 MFSD12Q6NUT3 480 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 C22orf34Q6ZV56 151 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 SLC43A2Q8N370 569 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 VPS37AQ8NEZ2 397 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 OR4C3Q8NH37 302 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 FBXO30Q8TB52 745 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 OSTF1Q92882 214 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 CIDECQ96AQ7 238 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-209ENST00000366735 ASB9Q96DX5 294 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 HS6ST2Q96MM7 605 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 ANKRD27Q96NW4 1050 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 STACQ99469 402 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 SH3GL1Q99961 368 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 BTBD2Q9BX70 525 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 HOXD1Q9GZZ0 328 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 PAIP1Q9H074 479 aaKnown RBP11.04□□□□□ -0.64
MRPL55-209ENST00000366735 FBXO34Q9NWN3 711 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 SH3BP4Q9P0V3 963 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 NTMQ9P121 344 aa11.04□□□□□ -0.64
MRPL55-209ENST00000366735 GPC6Q9Y625 555 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-209ENST00000366735 NUP214P35658 2090 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-209ENST00000366735 A0A0J9YW62 118 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 RNASET2O00584 256 aaKnown RBP11.03□□□□□ -0.64
MRPL55-209ENST00000366735 ENTPD5O75356 428 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 PRKD3O94806 890 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 ZCCHC18P0CG32 403 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 ACP2P11117 423 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 LAMP1P11279 417 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 PSMA4P25789 261 aaKnown RBP11.03□□□□□ -0.64
MRPL55-209ENST00000366735 SLC7A1P30825 629 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 FRKP42685 505 aaPredicted RBP11.03□□□□□ -0.64
MRPL55-209ENST00000366735 P2RX1P51575 399 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 FOXF1Q12946 379 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 BNIP2Q12982 314 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 SELENBP1Q13228 472 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 P2RY6Q15077 328 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 DUSP5Q16690 384 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 RUNDC3AQ59EK9 446 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 C6orf10Q5SRN2 563 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 NCMAPQ5T1S8 102 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 SFRP5Q5T4F7 317 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 PODNL1Q6PEZ8 512 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 TFAP2EQ6VUC0 442 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 FCRLAQ7L513 359 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 MSRB3Q8IXL7 192 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 FAM110BQ8TC76 370 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 PHOSPHO1Q8TCT1 267 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 ZFP90Q8TF47 636 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 CCDC124Q96CT7 223 aaKnown RBP11.03□□□□□ -0.64
MRPL55-209ENST00000366735 MUC13Q9H3R2 512 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 DCLRE1BQ9H816 532 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 DUSP22Q9NRW4 184 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 ZCCHC3Q9NUD5 404 aaKnown RBP11.03□□□□□ -0.64
MRPL55-209ENST00000366735 GIN1Q9NXP7 522 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 SLC25A37Q9NYZ2 338 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 VAPAQ9P0L0 249 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 KLHL9Q9P2J3 617 aa11.03□□□□□ -0.64
MRPL55-209ENST00000366735 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 RNF223E7ERA6 249 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 RFXANKO14593 260 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 FKBP6O75344 327 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 GCM2O75603 506 aaPredicted RBP11.02□□□□□ -0.65
MRPL55-209ENST00000366735 OPN1LWP04000 364 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 LINGO3P0C6S8 592 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 GSK3BP49841 420 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 MS4A2Q01362 244 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 LIPEQ05469 1076 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 ITGADQ13349 1161 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 CCNIQ14094 377 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 FLOT2Q14254 428 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 MLC1Q15049 377 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 NRF1Q16656 503 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 ZNF672Q499Z4 452 aaPredicted RBP11.02□□□□□ -0.65
MRPL55-209ENST00000366735 RABL3Q5HYI8 236 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 ANKRD26P1Q6NSI1 321 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 GABRG1Q8N1C3 465 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 RNF148Q8N7C7 305 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 SLC16A11Q8NCK7 471 aa11.02□□□□□ -0.65
MRPL55-209ENST00000366735 OR56A1Q8NGH5 318 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms