RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 AQP12AQ8IXF9 295 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 PHF10Q8WUB8 498 aaKnown RBP10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 RND1Q92730 232 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 CPNE4Q96A23 557 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 ZHX1-C8orf76Q96EF9 292 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 SLC41A3Q96GZ6 507 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 ADGRG7Q96K78 797 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 HS6ST2Q96MM7 605 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 EPYCQ99645 322 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 TTYH2Q9BSA4 534 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 TAPBPLQ9BX59 468 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 ERRFI1Q9UJM3 462 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 POMPQ9Y244 141 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 ZNF175Q9Y473 711 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 V9GYQ6 96 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 KALRNO60229 2985 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 A0A1W2PNR3 127 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 SLC22A20A6NK97 555 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 DNPH1O43598 174 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 OR2T1O43869 369 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 AHSA1O95433 338 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 PMS2P2O95744 297 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 GLI4P10075 376 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 UMPSP11172 480 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 FCGR2AP12318 317 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 HOXB6P17509 224 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 RHCEP18577 417 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 ATP6V1B2P21281 511 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 ENPP1P22413 925 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 SHC1P29353 583 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 IDUAP35475 653 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 TIMP3P35625 211 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 YAP1P46937 504 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 DIO1P49895 249 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 SMIM11AP58511 58 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 SLC35A1P78382 337 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 MYBPHQ13203 477 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 PON3Q15166 354 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 CTU2Q2VPK5 515 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 EEF1A1P5Q5VTE0 462 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 C1orf140Q5VVS0 124 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 RTL6Q6ICC9 239 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 OR2A2Q6IF42 318 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 PPP4R4Q6NUP7 873 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 LINC00114Q6XXX2 140 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 GDF7Q7Z4P5 450 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 YTHDF3Q7Z739 585 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 ADGRE4PQ86SQ3 457 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 ZNF845Q96IR2 970 aaPredicted RBP10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 ARL5BQ96KC2 179 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 C7orf34Q96L11 122 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 PRRC1Q96M27 445 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 DMRTA2Q96SC8 542 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 SEPHS2Q99611 448 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 NAA11Q9BSU3 229 aaPredicted RBP10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 TMEM43Q9BTV4 400 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 OR11A1Q9GZK7 315 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 MAGIXQ9H6Y5 334 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 SLC7A8Q9UHI5 535 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 SLC7A7Q9UM01 511 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 FAM215AQ9Y5M1 114 aa10.69□□□□□ -0.7
SPTLC1-202ENST00000337841 ZNF462Q96JM2 2506 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 TRAV36DV7A0A075B6V5 113 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 HSPB2A8KAH6 182 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 EIF1BO60739 113 aaKnown RBP10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 AGFG2O95081 481 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 FABP3P05413 133 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 GPIP06744 558 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 RBM34P42696 430 aaKnown RBP10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 AGFG1P52594 562 aaKnown RBP10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 NUP107P57740 925 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 FOXD4Q12950 439 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 MFSD13AQ14CX5 517 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 TRAM2Q15035 370 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 HSPB2Q16082 182 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 RIPPLY2Q5TAB7 128 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 RRM2BQ7LG56 351 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 SPATA24Q86W54 205 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 MCEMP1Q8IX19 187 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 SLC43A2Q8N370 569 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 C10orf53Q8N6V4 93 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 FAM86B1Q8N7N1 296 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 MFSD8Q8NHS3 518 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 ZNF300Q96RE9 604 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 ZNF347Q96SE7 839 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 SLC19A3Q9BZV2 496 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 IL1RAPQ9NPH3 570 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 COQ3Q9NZJ6 369 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 NDUFAF4Q9P032 175 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 A4GNTQ9UNA3 340 aa10.68□□□□□ -0.7
SPTLC1-202ENST00000337841 SHANK1Q9Y566 2161 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 CFAP46Q8IYW2 2715 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 TCRBV5S2A0A599 114 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 ZC3H12DA2A288 527 aaKnown RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 HTR3EA5X5Y0 456 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 MBD3L4A6NDZ8 208 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 MBD3L3A6NE82 208 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 MBD3L5A6NJ08 208 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 hCG_2039718K7EN88 272 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 NPIPB7O75200 414 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms