RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PLA2G15Q8NCC3 412 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF461Q8TAF7 563 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 GPR148Q8TDV2 347 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF583Q96ND8 569 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SPIN2AQ99865 258 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SPIN2BQ9BPZ2 258 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 FBXL2Q9UKC9 423 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 A6NIN4 97 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RANBP10Q6VN20 620 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 LAS2Q8IYD9 372 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 NUP43Q8NFH3 380 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 LCN9Q8WX39 176 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 CPNE7Q9UBL6 633 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 CLEC2DQ9UHP7 191 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 CBR1P16152 277 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 EPHA5P54756 1037 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SP2Q02086 613 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 DECR1Q16698 335 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 IQCJQ1A5X6 159 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 FRMPD2BQ6IN97 320 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RD3Q7Z3Z2 195 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SLC22A15Q8IZD6 547 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 LRRC25Q8N386 305 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ARFGAP1Q8N6T3 406 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 C16orf78Q8WTQ4 265 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SAMD8Q96LT4 415 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ELF4Q99607 663 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 OR2AG1Q9H205 316 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM38AQ9H6F2 299 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ACKR4Q9NPB9 350 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 IL36AQ9UHA7 158 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 B3GALT1Q9Y5Z6 326 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 GLOD5A6NK44 160 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 AQP8O94778 261 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF140P52738 457 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 VGLL4Q14135 290 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 FAM182AQ5T1J6 154 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 NXNL2Q5VZ03 156 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 KCNRGQ8N5I3 272 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 OR6N2Q8NGY6 317 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 OR52N1Q8NH53 320 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 PHYHIPLQ96FC7 376 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 C1QTNF2Q9BXJ5 285 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 LSM5Q9Y4Y9 91 aaKnown RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 KLRG2A4D1S0 409 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 JTBO76095 146 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 AKR1A1P14550 325 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 IFNGR1P15260 489 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 GRPRP30550 384 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 MMP15P51511 669 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 OR2B8PP59922 312 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 HBA1P69905 142 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PTPRCAPQ14761 206 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PIP5KL1Q5T9C9 394 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 OR10G6Q8NH81 332 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 APIPQ96GX9 242 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TEX37Q96LM6 180 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 CYB5BO43169 146 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 MPC1LP0DKB6 136 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 CPN1P15169 458 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PREPP48147 710 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 HSD17B7P56937 341 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SYT14P1Q58G82 188 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PDSS1Q5T2R2 415 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM65Q6PI78 240 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 MRPL10Q7Z7H8 261 aaKnown RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 C7orf61Q8IZ16 206 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ATOH8Q96SQ7 321 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SUV39H2Q9H5I1 410 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PARPBPQ9NWS1 579 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 REV1Q9UBZ9 1251 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TAC3Q9UHF0 121 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 CLEC4EQ9ULY5 219 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF850A8MQ14 1090 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 A8MXE2 369 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 GPR89AB7ZAQ6 455 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PNPP00491 289 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 GPR89BP0CG08 455 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SRP9P49458 86 aaKnown RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 CCR9P51686 369 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PIN1Q13526 163 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SLC8B1Q6J4K2 584 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 OR51D1Q8NGF3 324 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 APH1BQ8WW43 257 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ABT1Q9ULW3 272 aaKnown RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 BTBD17A6NE02 478 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 AK1P00568 194 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ANXA7P20073 488 aaKnown RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 VIPR1P32241 457 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 F2RL1P55085 397 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 TAS2R38P59533 333 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 KIAA0141Q14154 515 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PODNL1Q6PEZ8 512 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 CELF5Q8N6W0 485 aaKnown RBP6.6□□□□□ -1.35
SMC1A-201ENST00000322213 MOGAT1Q96PD6 335 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SYT3Q9BQG1 590 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 SUCNR1Q9BXA5 334 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 A0A0B4J2A0 478 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 PIP5K1CO60331 668 aa6.6□□□□□ -1.35
SMC1A-201ENST00000322213 ATG12O94817 140 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms