RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 OR10A3P58181 314 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF85Q03923 595 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 INSL4Q14641 139 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 MICBQ29980 383 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PRSS53Q2L4Q9 553 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 VWA2Q5GFL6 755 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PIP5KL1Q5T9C9 394 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 AMZ2Q86W34 360 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 NRROSQ86YC3 692 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 NUP43Q8NFH3 380 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 OR1S1Q8NH92 325 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 WFIKKN2Q8TEU8 576 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 LINC01599Q8WXQ3 324 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 MRPS24Q96EL2 167 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PELI1Q96FA3 418 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TBX5Q99593 518 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF334Q9HCZ1 680 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TDP1Q9NUW8 608 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 AK6Q9Y3D8 172 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 INSL5Q9Y5Q6 135 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM14AQ9Y6G1 99 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 LCTP09848 1927 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 E9PI62 339 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 B4GALT2O60909 372 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ANXA2P07355 339 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SLC35G4P0C7Q5 338 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ERGP11308 486 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TIMP2P16035 220 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 LAG3P18627 525 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SRMP19623 302 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CSF2RBP32927 897 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 RAB28P51157 221 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 LSM11P83369 360 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CYCSP99999 105 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PRDX1Q06830 199 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 DPTQ07507 201 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 HFEQ30201 348 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 C4orf46Q504U0 113 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 HEPHL1Q6MZM0 1159 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 MFSD12Q6NUT3 480 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 FAM199XQ6PEV8 388 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF613Q6PF04 617 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 FCRLAQ7L513 359 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CHST14Q8NCH0 376 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ELP5Q8TE02 316 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TCEAL3Q969E4 200 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 DTD2Q96FN9 168 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CXorf58Q96LI9 332 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SORBS1Q9BX66 1292 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 C1QTNF6Q9BXI9 259 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 APMAPQ9HDC9 416 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PRSS16Q9NQE7 514 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SIGLEC7Q9Y286 467 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 BCL2L11O43521 198 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 KCNJ13O60928 360 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 LEFTY1O75610 366 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 KLHL18O94889 574 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 GLSO94925 669 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 EDNRAP25101 427 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 S100PP25815 95 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CRMP1Q14194 572 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 FAM27D1Q5T7N8 215 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 GLT8D1Q68CQ7 371 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ABHD17CQ6PCB6 329 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZCCHC12Q6PEW1 402 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ACOT7LQ6ZUV0 252 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 MTSS1LQ765P7 747 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF546Q86UE3 836 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 IZUMO1Q8IYV9 350 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CMTM8Q8IZV2 173 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 LINC00469Q8N7U9 141 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 THAP6Q8TBB0 222 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ASB12Q8WXK4 309 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 OR7D2Q96RA2 312 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TIMP4Q99727 224 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF471Q9BX82 626 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 RSPO3Q9BXY4 272 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 EXO5Q9H790 373 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 IL21Q9HBE4 155 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SPHK1Q9NYA1 384 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SERTAD3Q9UJW9 196 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF223Q9UK11 482 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZMIZ1Q9ULJ6 1067 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 FLVCR2Q9UPI3 526 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TANC1Q9C0D5 1861 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 A0A0A6YYD5 115 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 HEXAP06865 529 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SLC25A4P12235 298 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 DUSP8Q13202 625 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 DGLUCYQ7Z3D6 616 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF227Q86WZ6 799 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 OR2L5Q8NG80 312 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 PRAP1Q96NZ9 151 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 CASD1Q96PB1 797 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 OR14A2Q96R54 314 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM121BQ9BXQ6 578 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 OR52A5Q9H2C5 316 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 NCDNQ9UBB6 729 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ST6GALNAC2Q9UJ37 374 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 MRTO4Q9UKD2 239 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms