RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 C4orf36Q96KX1 117 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 FOXN4Q96NZ1 517 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 MROQ9BYG7 248 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 UBQLN4Q9NRR5 601 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 B3GNT3Q9Y2A9 372 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 A0A1W2PQL4 384 aaPredicted RBP13.34□□□□□ -0.27
SMG8-201ENST00000300917 H3BMH7 237 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 CDC40O60508 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMG8-201ENST00000300917 HK1P19367 917 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 SLC6A6P31641 620 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 PYCR1P32322 319 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 EID2Q8N6I1 236 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 SLC30A2Q9BRI3 323 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 ZNF649Q9BS31 505 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 KATNB1Q9BVA0 655 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 SMOC1Q9H4F8 434 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 APMAPQ9HDC9 416 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 SLC35A3Q9Y2D2 325 aa13.34□□□□□ -0.27
SMG8-201ENST00000300917 SF3B6Q9Y3B4 125 aaKnown RBP13.34□□□□□ -0.27
SMG8-201ENST00000300917 A0A1B0GVC2 190 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 FITM1A5D6W6 292 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 A6NIN4 97 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.33□□□□□ -0.27
SMG8-201ENST00000300917 SIGLEC6O43699 453 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 PEPDP12955 493 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.33□□□□□ -0.27
SMG8-201ENST00000300917 FHL1Q13642 323 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 CCDC157Q569K6 752 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 TMPRSS11AQ6ZMR5 421 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 ZNF554Q86TJ5 538 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 ZNF721Q8TF20 911 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 SMPDL3BQ92485 455 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 HOXB13Q92826 284 aaPredicted RBP13.33□□□□□ -0.27
SMG8-201ENST00000300917 SLC25A36Q96CQ1 311 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 LCORQ96JN0 433 aaPredicted RBP13.33□□□□□ -0.27
SMG8-201ENST00000300917 MRPS18AQ9NVS2 196 aaKnown RBP13.33□□□□□ -0.27
SMG8-201ENST00000300917 ASB6Q9NWX5 421 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 FER1L5A0AVI2 2057 aa13.33□□□□□ -0.27
SMG8-201ENST00000300917 GABRPO00591 440 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 AKAP8O43823 692 aaKnown RBP13.33□□□□□ -0.28
SMG8-201ENST00000300917 CBFA2T3O75081 653 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 RPS27P42677 84 aaKnown RBP13.33□□□□□ -0.28
SMG8-201ENST00000300917 RPS5P46782 204 aaKnown RBP13.33□□□□□ -0.28
SMG8-201ENST00000300917 PLCXD2Q0VAA5 305 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 TPBGQ13641 420 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 KLHL26Q53HC5 615 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 GID4Q8IVV7 300 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 D2HGDHQ8N465 521 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 NEIL3Q8TAT5 605 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 ADAMTS18Q8TE60 1221 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 C8orf44Q96CB5 159 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 ZNF501Q96CX3 271 aaPredicted RBP13.33□□□□□ -0.28
SMG8-201ENST00000300917 Q96M85 177 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 AKIRIN1Q9H9L7 192 aaPredicted RBP13.33□□□□□ -0.28
SMG8-201ENST00000300917 SACM1LQ9NTJ5 587 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 MED17Q9NVC6 651 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 CEP192Q8TEP8 1941 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 A0A1B0GX78 115 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 A0A1W2PRG6 482 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 NDUFB2O95178 105 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 MST1P26927 711 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 CCL7P80098 99 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 FAM131AQ6UXB0 335 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 SYT9Q86SS6 491 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 GRAMD2AQ8IUY3 354 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 LSMEM1Q8N8F7 131 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 C17orf47Q8NEP4 570 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 ASB15Q8WXK1 588 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 DIRAS2Q96HU8 199 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 NXF2Q9GZY0 626 aaKnown RBP13.33□□□□□ -0.28
SMG8-201ENST00000300917 DUSP15Q9H1R2 295 aaPredicted RBP13.33□□□□□ -0.28
SMG8-201ENST00000300917 CLEC4AQ9UMR7 237 aa13.33□□□□□ -0.28
SMG8-201ENST00000300917 A0A087WUJ7 227 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 IRGMA1A4Y4 181 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 C11orf98E9PRG8 122 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 ZNF264O43296 627 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 PLGP00747 810 aaPredicted RBP13.32□□□□□ -0.28
SMG8-201ENST00000300917 TGM1P22735 817 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 TACR3P29371 465 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 PPICP45877 212 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 EPHA4P54764 986 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 CTBP2P56545 445 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 IL20RBQ6UXL0 311 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 ZNF485Q8NCK3 441 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 CLDN23Q96B33 292 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 KTI12Q96EK9 354 aaPredicted RBP13.32□□□□□ -0.28
SMG8-201ENST00000300917 SLC22A11Q9NSA0 550 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 CRNNQ9UBG3 495 aaPredicted RBP13.32□□□□□ -0.28
SMG8-201ENST00000300917 GSTK1Q9Y2Q3 226 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 TEX13CA0A0J9YWL9 993 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 A0A1W2PQM1 296 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 SELENOFO60613 162 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 SBK2P0C263 348 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 ENDOUP21128 410 aaKnown RBP13.32□□□□□ -0.28
SMG8-201ENST00000300917 PSMB10P40306 273 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 HLA-BQ31612 363 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 PHF19Q5T6S3 580 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 OR5J2Q8NH18 312 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 STT3BQ8TCJ2 826 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 ORAI1Q96D31 301 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms