RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CREB3L1Q96BA8 519 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 ST6GAL2Q96JF0 529 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 FBXL21Q9UKT6 434 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 RWDD3Q9Y3V2 267 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 PCYT1BQ9Y5K3 369 aaPredicted RBP12.33□□□□□ -0.44
CASC4-201ENST00000299957 A3GALT2U3KPV4 340 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 C17orf113A0A1B0GUU1 675 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 GPR89AB7ZAQ6 455 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 MAN2B1O00754 1011 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 SCGB1D2O95969 90 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 GPR89BP0CG08 455 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 PUDPQ08623 228 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 SPOCK1Q08629 439 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 EFR3AQ14156 821 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 UBXN2BQ14CS0 331 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 C1QTNF12Q5T7M4 302 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 MBOAT2Q6ZWT7 520 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 RNF170Q96K19 258 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 GON7Q9BXV9 100 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 SLC38A1Q9H2H9 487 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 MLXQ9UH92 298 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 VDAC3Q9Y277 283 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 PRSS38A1L453 326 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 CPED1A4D0V7 1026 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 OR14I1A6ND48 311 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 TRABD2BA6NFA1 517 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 C2orf74A8MZ97 194 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 CDC42EP2O14613 210 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 RP2O75695 350 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 ZNF79Q15937 498 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 OCLNQ16625 522 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 HBMQ6B0K9 141 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 Q6ZSR6 202 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 ZNF765Q7L2R6 523 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 PLCZ1Q86YW0 608 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 OR4N2Q8NGD1 307 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 SLC23A1Q9UHI7 598 aa12.33□□□□□ -0.44
CASC4-201ENST00000299957 SLC22A5O76082 557 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 TIMP1P01033 207 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 TNFP01375 233 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 IGHA2P01877 340 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 CPEP16870 476 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 C5AR1P21730 350 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 HTR1FP30939 366 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 GZMKP49863 264 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 AKR1C2P52895 323 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 AKR1C1Q04828 323 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 ASAH1Q13510 395 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 ARHGAP19Q14CB8 494 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 ZNF620Q6ZNG0 422 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 AVL9Q8NBF6 648 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 KLK11Q9UBX7 282 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 AP1M2Q9Y6Q5 423 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 NBASA2RRP1 2371 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 KANTRA0A1W2PQU2 76 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 FGF17O60258 216 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 CYB5AP00167 134 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 TP53P04637 393 aaPredicted RBP12.32□□□□□ -0.44
CASC4-201ENST00000299957 NTSR1P30989 418 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 OR3A2P47893 321 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 RFX2P48378 723 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 CRYBA2P53672 197 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 ACTC1P68032 377 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 ACTA1P68133 377 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 GPR18Q14330 331 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 ALG10Q5BKT4 473 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 GARNL3Q5VVW2 1013 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 BEST3Q8N1M1 668 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 TMEM106AQ96A25 262 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 UPRTQ96BW1 309 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 SDF2Q99470 211 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 SAV1Q9H4B6 383 aaPredicted RBP12.32□□□□□ -0.44
CASC4-201ENST00000299957 RGS11O94810 467 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 APBB3O95704 486 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 PBX2P40425 430 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 NR0B1P51843 470 aaKnown RBP12.32□□□□□ -0.44
CASC4-201ENST00000299957 SIRPAP78324 504 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 GPR50Q13585 617 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 OR51D1Q8NGF3 324 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 DNAJA4Q8WW22 397 aaPredicted RBP12.32□□□□□ -0.44
CASC4-201ENST00000299957 OR1E3Q8WZA6 343 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 METTL8Q9H825 291 aaKnown RBP12.32□□□□□ -0.44
CASC4-201ENST00000299957 ASB6Q9NWX5 421 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 COPS7AQ9UBW8 275 aa12.32□□□□□ -0.44
CASC4-201ENST00000299957 ROS1P08922 2347 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 OTOL1A6NHN0 477 aaPredicted RBP12.31□□□□□ -0.44
CASC4-201ENST00000299957 KDM4EB2RXH2 506 aaPredicted RBP12.31□□□□□ -0.44
CASC4-201ENST00000299957 ADH1BP00325 375 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 SBK2P0C263 348 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 F3P13726 295 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 MAOAP21397 527 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 ZNF77Q15935 545 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 KIF18BQ86Y91 864 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 INO80EQ8NBZ0 244 aaPredicted RBP12.31□□□□□ -0.44
CASC4-201ENST00000299957 C17orf47Q8NEP4 570 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 OR52I2Q8NH67 350 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 SPPL3Q8TCT6 385 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 GAL3ST3Q96A11 431 aa12.31□□□□□ -0.44
CASC4-201ENST00000299957 TMEM43Q9BTV4 400 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms