RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PCP4L1A6NKN8 68 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 H3BUI4 141 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 IMPA2O14732 288 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 BMP7P18075 431 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 AZGP1P25311 298 aaKnown RBP12.45□□□□□ -0.42
VMP1-201ENST00000262291 RPS7P62081 194 aaKnown RBP12.45□□□□□ -0.42
VMP1-201ENST00000262291 DSG2Q14126 1118 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 ZNF141Q15928 474 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 PMS2CLQ68D20 193 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 MRGPREQ86SM8 312 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 OAFQ86UD1 273 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 NOXA1Q86UR1 476 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 SIRT6Q8N6T7 355 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 OR52L1Q8NGH7 329 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 OR51L1Q8NGJ5 315 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 OR5M3Q8NGP4 307 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 ZNF721Q8TF20 911 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 RNF170Q96K19 258 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 CDADC1Q9BWV3 514 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 POLE3Q9NRF9 147 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 TEKT2Q9UIF3 430 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 SIGLEC7Q9Y286 467 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 MN1Q10571 1320 aaPredicted RBP12.45□□□□□ -0.42
VMP1-201ENST00000262291 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 SNTNA6NMZ2 147 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 C4orf47A7E2U8 309 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 KDM4EB2RXH2 506 aaPredicted RBP12.45□□□□□ -0.42
VMP1-201ENST00000262291 FAM25AB3EWG3 89 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 FAM25CB3EWG5 89 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 FAM25GB3EWG6 89 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 CHP2O43745 196 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 WISP1O95388 367 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 UTS2O95399 124 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 LALBAP00709 142 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 DAB2P98082 770 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 TAB1Q15750 504 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 ZNF613Q6PF04 617 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 CHAC2Q8WUX2 184 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 TM9SF2Q99805 663 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 ERVMER34-1Q9H9K5 563 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 APMAPQ9HDC9 416 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 KRCC1Q9NPI7 259 aaPredicted RBP12.45□□□□□ -0.42
VMP1-201ENST00000262291 H2AFY2Q9P0M6 372 aaPredicted RBP12.45□□□□□ -0.42
VMP1-201ENST00000262291 PRODH2Q9UF12 536 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 PILRBQ9UKJ0 227 aa12.45□□□□□ -0.42
VMP1-201ENST00000262291 TECTAO75443 2155 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 IGKV3D-11A0A0A0MRZ8 115 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 A0A1B0GX78 115 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 BHLHE40O14503 412 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 ICOSLGO75144 302 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 SCG5P05408 212 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 LIMS3P0CW19 117 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 LIMS4P0CW20 117 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 MADCAM1Q13477 382 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 PLK5Q496M5 336 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 SLC51BQ86UW2 128 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 C9orf40Q8IXQ3 194 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 UBE2J2Q8N2K1 259 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 SAP25Q8TEE9 199 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 FN3KQ9H479 309 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 TBC1D24Q9ULP9 559 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 C2orf92A0A1B0GVN3 265 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 GTPBP1O00178 669 aaKnown RBP12.44□□□□□ -0.42
VMP1-201ENST00000262291 CTDSP2O14595 271 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 AKR7A2O43488 359 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 RORAP35398 523 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 DDOSTP39656 456 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 FOXK2Q01167 660 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 INSL4Q14641 139 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 PHC2Q8IXK0 858 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 PROKR2Q8NFJ6 384 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 OR9Q1Q8NGQ5 310 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 TRIM2Q9C040 744 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 MCCC2Q9HCC0 563 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 ACOXLQ9NUZ1 547 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 ADAM18Q9Y3Q7 739 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 PCNX3Q9H6A9 2034 aa12.44□□□□□ -0.42
VMP1-201ENST00000262291 A0A1B0GTQ1 180 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 LOC110117498-PIK3R3F6TDL0 507 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 PLD2O14939 933 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 LAMTOR5O43504 91 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 FMO6PO60774 539 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 RPS25P62851 125 aaKnown RBP12.43□□□□□ -0.42
VMP1-201ENST00000262291 GPR50Q13585 617 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 C1DQ13901 141 aaKnown RBP12.43□□□□□ -0.42
VMP1-201ENST00000262291 NR0B2Q15466 257 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 KLHL22Q53GT1 634 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 KLHL26Q53HC5 615 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 SLC25A30Q5SVS4 291 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 WDR74Q6RFH5 385 aaPredicted RBP12.43□□□□□ -0.42
VMP1-201ENST00000262291 C10orf53Q8N6V4 93 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 TMEM99Q8N816 258 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 BRIX1Q8TDN6 353 aaKnown RBP12.43□□□□□ -0.42
VMP1-201ENST00000262291 UBASH3BQ8TF42 649 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 SECISBP2Q96T21 854 aaKnown RBP12.43□□□□□ -0.42
VMP1-201ENST00000262291 SDHCQ99643 169 aaPredicted RBP12.43□□□□□ -0.42
VMP1-201ENST00000262291 BCL7BQ9BQE9 202 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 GTPBP2Q9BX10 602 aaKnown RBP12.43□□□□□ -0.42
VMP1-201ENST00000262291 TEX12Q9BXU0 123 aa12.43□□□□□ -0.42
VMP1-201ENST00000262291 AKIRIN1Q9H9L7 192 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms