RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 SLC1A3P43003 542 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 GFRA1P56159 465 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 B3GALT5-AS1P59052 145 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 FOXK1P85037 733 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 C19orf57Q0VDD7 668 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 SEC23BQ15437 767 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 NHSL2Q5HYW2 709 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 SWT1Q5T5J6 900 aaKnown RBP18.69■□□□□ 0.58
RTCA-201ENST00000260563 PPP4R4Q6NUP7 873 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 OR10G2Q8NGC3 310 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 C3orf49Q96BT1 292 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 ZNF524Q96C55 264 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 NPAS1Q99742 590 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 VCXQ9H320 206 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 C8orf4Q9NR00 106 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 SPRR3Q9UBC9 169 aa18.69■□□□□ 0.58
RTCA-201ENST00000260563 SH3PXD2BA1X283 911 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 LINC01387J3KSC0 135 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 ETV2O00321 342 aaPredicted RBP18.68■□□□□ 0.58
RTCA-201ENST00000260563 EI24O14681 340 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 ZNF26P17031 533 aaPredicted RBP18.68■□□□□ 0.58
RTCA-201ENST00000260563 PRKACGP22612 351 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 CHMP24386 653 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 ELK4P28324 431 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 TMEM44Q2T9K0 475 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 SLC25A53Q5H9E4 307 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 GRINAQ7Z429 371 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 PACRGLQ8N7B6 248 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 POC1BQ8TC44 478 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 ABTB1Q969K4 478 aaPredicted RBP18.68■□□□□ 0.58
RTCA-201ENST00000260563 MIB2Q96AX9 1013 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 SARAFQ96BY9 339 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 MPP4Q96JB8 637 aa18.68■□□□□ 0.58
RTCA-201ENST00000260563 MPDZO75970 2070 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 A0A087WUU8 490 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 ARRDC5A6NEK1 342 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 H3BML4 177 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 ACTL6AO96019 429 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 HTR3AP46098 478 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 DLX5P56178 289 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 PPP2R2BQ00005 443 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 RBPJQ06330 500 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 MERTKQ12866 999 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 ZNF730Q6ZMV8 503 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 WDR88Q6ZMY6 472 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 GALNT4Q8N4A0 578 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 LINC00471Q8N535 108 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 MAGEE2Q8TD90 523 aaPredicted RBP18.67■□□□□ 0.58
RTCA-201ENST00000260563 TMEM255BQ8WV15 326 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 ACOT11Q8WXI4 607 aaPredicted RBP18.67■□□□□ 0.58
RTCA-201ENST00000260563 RBM4BQ9BQ04 359 aaKnown RBP18.67■□□□□ 0.58
RTCA-201ENST00000260563 PSD2Q9BQI7 771 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 RBM4Q9BWF3 364 aaKnown RBP18.67■□□□□ 0.58
RTCA-201ENST00000260563 OSBPL10Q9BXB5 764 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 ADAM19Q9H013 955 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 C12orf10Q9HB07 376 aa18.67■□□□□ 0.58
RTCA-201ENST00000260563 KIAA1549Q9HCM3 1950 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 OR14I1A6ND48 311 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 OR10H3O60404 316 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 NTN1O95631 604 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 PNMTP11086 282 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 ABOP16442 354 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 BMP7P18075 431 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 POU3F2P20265 443 aaPredicted RBP18.66■□□□□ 0.58
RTCA-201ENST00000260563 TACR3P29371 465 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 PTGS2P35354 604 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 ALDH3A2P51648 485 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 CRYZQ08257 329 aaKnown RBP18.66■□□□□ 0.58
RTCA-201ENST00000260563 DAG1Q14118 895 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 VASNQ6EMK4 673 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 LINC00114Q6XXX2 140 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 ATG4DQ86TL0 474 aaPredicted RBP18.66■□□□□ 0.58
RTCA-201ENST00000260563 OR4K5Q8NGD3 323 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 OR9Q2Q8NGE9 314 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 TACO1Q9BSH4 297 aaKnown RBP18.66■□□□□ 0.58
RTCA-201ENST00000260563 SMURF2Q9HAU4 748 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 USE1Q9NZ43 259 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 TNFRSF10DQ9UBN6 386 aa18.66■□□□□ 0.58
RTCA-201ENST00000260563 A0A087WUJ7 227 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 NPIPA2E9PIF3 369 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 NPIPA3F8WFD2 350 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 HPRP00739 348 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 APOBEC1P41238 236 aaKnown RBP18.65■□□□□ 0.58
RTCA-201ENST00000260563 RBM34P42696 430 aaKnown RBP18.65■□□□□ 0.58
RTCA-201ENST00000260563 POLR2HP52434 150 aaKnown RBP18.65■□□□□ 0.58
RTCA-201ENST00000260563 SELENBP1Q13228 472 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 ZNF770Q6IQ21 691 aaPredicted RBP18.65■□□□□ 0.58
RTCA-201ENST00000260563 C3orf33Q6P1S2 294 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 POMZP3Q6PJE2 187 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 MBOAT2Q6ZWT7 520 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 RRM2BQ7LG56 351 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 ATG16L2Q8NAA4 619 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 TMEM239Q8WW34 195 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 HS6ST2Q96MM7 605 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 ZNF426Q9BUY5 554 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 KIF17Q9P2E2 1029 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 ZNF337Q9Y3M9 751 aa18.65■□□□□ 0.58
RTCA-201ENST00000260563 ELOA3DA6NLF2 546 aaPredicted RBP18.64■□□□□ 0.58
RTCA-201ENST00000260563 ZNHIT1O43257 154 aa18.64■□□□□ 0.58
RTCA-201ENST00000260563 ALPLP05186 524 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms