RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 CA10Q9NS85 328 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 SLCO1C1Q9NYB5 712 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 NDOR1Q9UHB4 597 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 FBXL2Q9UKC9 423 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 TBX21Q9UL17 535 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 OR10H1Q9Y4A9 318 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 ASB4Q9Y574 426 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 DUXAA6NLW8 204 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 HTR2AP28223 471 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 NUP62P37198 522 aaPredicted RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PON3Q15166 354 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 GSG1Q2KHT4 349 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 CDONQ4KMG0 1287 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 HEPHL1Q6MZM0 1159 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 MFSD12Q6NUT3 480 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 BPHLQ86WA6 291 aaPredicted RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 OR2L3Q8NG85 312 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 SYNPRQ8TBG9 265 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 RBPMSQ93062 196 aaKnown RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 RASD2Q96D21 266 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 OR2M2Q96R28 347 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 BAIAP2Q9UQB8 552 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 SESN1Q9Y6P5 492 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 H0Y8X5 98 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 CACNB4O00305 520 aaPredicted RBP11.06□□□□□ -0.64
USHBP1-201ENST00000252597 IFNGP01579 166 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 TPOP07202 933 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 MYOGP15173 224 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 TYRP1P17643 537 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 BTCP35070 178 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PPM1AP35813 382 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PTH2RP49190 550 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PITPNAQ00169 270 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PUDPQ08623 228 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 C19orf57Q0VDD7 668 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 FAM74A1Q5RGS3 127 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 C3P1Q6ZMU1 363 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 SLITRK4Q8IW52 837 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 OR4N2Q8NGD1 307 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 PATE1Q8WXA2 126 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 RBP7Q96R05 134 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 OR1F2PQ96R84 312 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 SDF2Q99470 211 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 CCDC3Q9BQI4 270 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 GSX2Q9BZM3 304 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 LMAN2LQ9H0V9 348 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 LIN7BQ9HAP6 207 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 GPR34Q9UPC5 381 aa11.06□□□□□ -0.64
USHBP1-201ENST00000252597 CELSR3Q9NYQ7 3312 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 EDDM13A0A1B0GTR0 161 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 PEX14O75381 377 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 TRIM3O75382 744 aaPredicted RBP11.05□□□□□ -0.64
USHBP1-201ENST00000252597 ARL6IP5O75915 188 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 FAM157BP0CG42 384 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 EPXP11678 715 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 HIST1H1CP16403 213 aaKnown RBP11.05□□□□□ -0.64
USHBP1-201ENST00000252597 CAMK2DQ13557 499 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 IRF4Q15306 451 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 DECR1Q16698 335 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 SLC36A2Q495M3 483 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 CD200R1LQ6Q8B3 271 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 GJD3Q8N144 294 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 SMARCD2Q92925 531 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 LMF1Q96S06 567 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 PHF11Q9UIL8 331 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 FARSAQ9Y285 508 aaKnown RBP11.05□□□□□ -0.64
USHBP1-201ENST00000252597 GOSR2O14653 212 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 F13BP05160 661 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 TMIGD3P0DMS9 266 aaPredicted RBP11.05□□□□□ -0.64
USHBP1-201ENST00000252597 DCST2Q5T1A1 773 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 KIAA1211LQ6NV74 962 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 TMEM65Q6PI78 240 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 ARSKQ6UWY0 536 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 OR5M1Q8NGP8 315 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 THEM6Q8WUY1 208 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 FCAMRQ8WWV6 532 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 ADAMTS14Q8WXS8 1223 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 RSPRY1Q96DX4 576 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 BCL2L10Q9HD36 194 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 DIABLOQ9NR28 239 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 ZMIZ1Q9ULJ6 1067 aa11.05□□□□□ -0.64
USHBP1-201ENST00000252597 TCF20Q9UGU0 1960 aaKnown RBP11.05□□□□□ -0.64
USHBP1-201ENST00000252597 C17orf113A0A1B0GUU1 675 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ANXA2P2A6NMY6 339 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 UBL3O95164 117 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 NUDT14O95848 222 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 GPANK1O95872 356 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ANXA2P07355 339 aaKnown RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ACSM4P0C7M7 580 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 PSMB1P20618 241 aaKnown RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 AMZ1Q400G9 498 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 SCGB2B2Q4G0G5 96 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 LIN54Q6MZP7 749 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 OR56B4Q8NH76 319 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ANGPTL6Q8NI99 470 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 TRIM43Q96BQ3 446 aaPredicted RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 SCMH1Q96GD3 660 aa11.04□□□□□ -0.64
USHBP1-201ENST00000252597 ZC3HAV1LQ96H79 300 aaKnown RBP11.04□□□□□ -0.64
USHBP1-201ENST00000252597 TOX2Q96NM4 488 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms