RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 NEIL3Q8TAT5 605 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 CNOT9Q92600 299 aaKnown RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 C1GALT1C1Q96EU7 318 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 HS3ST6Q96QI5 342 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 NPAS1Q99742 590 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 SH3GL1Q99961 368 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 HOPXQ9BPY8 73 aaPredicted RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 ECSITQ9BQ95 431 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 PIGQQ9BRB3 760 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 SPATA9Q9BWV2 254 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 GSX2Q9BZM3 304 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 OR2B2Q9GZK3 357 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 DSN1Q9H410 356 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 SPAG4Q9NPE6 437 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 RLIMQ9NVW2 624 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 ADA2Q9NZK5 511 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 CALML5Q9NZT1 146 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 TMEM181Q9P2C4 612 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 DKKL1Q9UK85 242 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 ICAM5Q9UMF0 924 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 CARD8Q9Y2G2 431 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 GPC6Q9Y625 555 aaPredicted RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 CDHR4A6H8M9 788 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 TMEM247A6NEH6 219 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 PRORSD1PA6NEY8 169 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 RNF212BA8MTL3 300 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 B2RBV5 119 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 TMEM229AB2RXF0 380 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 FAM47E-STBD1D6RA91 191 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 H3BNH8 94 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 ZNF264O43296 627 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 FRS3O43559 492 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 TPST1O60507 370 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 CYP7B1O75881 506 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 PDE5AO76074 875 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 CNOT4O95628 575 aaKnown RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 IL18BPO95998 194 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 CSTAP01040 98 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 HPNP05981 417 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 DBIP07108 87 aaKnown RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 PABPC4LP0CB38 370 aaKnown RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 PRG2P13727 222 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 ETS2P15036 469 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 NCK1P16333 377 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 CD247P20963 164 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 DPP4P27487 766 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 MSX2P35548 267 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 CLK3P49761 638 aaKnown RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 CCR4P51679 360 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 EEFSECP57772 596 aaKnown RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 B3GALT5-AS1P59052 145 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 DMTNQ08495 405 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 FOXF1Q12946 379 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 BNIP1Q12981 228 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 CEACAM7Q14002 265 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 SLC10A1Q14973 349 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 TOMM20Q15388 145 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 TOMM34Q15785 309 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 KRTAP24-1Q3LI83 254 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 GLIPR1L2Q4G1C9 344 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 LIN52Q52LA3 116 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 EIPR1Q53HC9 387 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 NHSL2Q5HYW2 709 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 WIPI1Q5MNZ9 446 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 RNF220Q5VTB9 566 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 C16orf89Q6UX73 402 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 DNM1P46Q6ZS02 220 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 EIF3MQ7L2H7 374 aaKnown RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 KRT73Q86Y46 540 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 LACC1Q8IV20 430 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 PEX5LQ8IYB4 626 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 METTL25Q8N6Q8 603 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 C9orf106Q8NAJ2 232 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 SMYD1Q8NB12 490 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 FAM83FQ8NEG4 500 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 GPR32P1Q8NGA4 272 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 OR5M1Q8NGP8 315 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 B4GALNT2Q8NHY0 566 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 OIT3Q8WWZ8 545 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 SLC7A6OSQ96CW6 309 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 DACH2Q96NX9 599 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 CDRT15Q96T59 188 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 TIMP4Q99727 224 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 KCTD14Q9BQ13 255 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 WFDC6Q9BQY6 131 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 BDH2Q9BUT1 245 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 ALG2Q9H553 416 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 MTHFD2LQ9H903 347 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 ZNF701Q9NV72 531 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 MED17Q9NVC6 651 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 QPCTLQ9NXS2 382 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 GALNT8Q9NY28 637 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 TAS2R1Q9NYW7 299 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 ACAD8Q9UKU7 415 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 VDAC3Q9Y277 283 aa6.64□□□□□ -1.35
PHGDH-225ENST00000641720 HEATR1Q9H583 2144 aaKnown RBP6.64□□□□□ -1.35
PHGDH-225ENST00000641720 A0A096LNT2 108 aa6.63□□□□□ -1.35
PHGDH-225ENST00000641720 ELOVL7A1L3X0 281 aa6.63□□□□□ -1.35
PHGDH-225ENST00000641720 SH3D21A4FU49 640 aa6.63□□□□□ -1.35
PHGDH-225ENST00000641720 CD8B2A6NJW9 211 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms