RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 T-ENOLP0DO92 83 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 HTR2AP28223 471 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 SLC7A1P30825 629 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 CHRNB4P30926 498 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 CPOXP36551 454 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 MAP2K6P52564 334 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 NCALDP61601 193 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 PON3Q15166 354 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 HSPB2Q16082 182 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 DEFB107AQ8IZN7 70 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 NAXEQ8NCW5 288 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 FIG4Q92562 907 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 C3orf49Q96BT1 292 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 ZFP3Q96NJ6 502 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 WFDC6Q9BQY6 131 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 BAG5Q9UL15 447 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 B2RBV5 119 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 M0R3H8 397 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 CXCR6O00574 342 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 GSTA4O15217 222 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 ZNF208O43345 1280 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 RCBTB2O95199 551 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 CLK1P49759 484 aaKnown RBP18.21■□□□□ 0.51
PTCD3-220ENST00000627371 CARD18P57730 90 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 SAMD4BQ5PRF9 694 aaKnown RBP18.21■□□□□ 0.51
PTCD3-220ENST00000627371 P4HA3Q7Z4N8 544 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 RANBP3LQ86VV4 465 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-220ENST00000627371 CCDC71Q8IV32 467 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-220ENST00000627371 RBM15BQ8NDT2 890 aaKnown RBP18.21■□□□□ 0.51
PTCD3-220ENST00000627371 OR52E4Q8NGH9 312 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 FNDC9Q8TBE3 224 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 OSTF1Q92882 214 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 OR5B2Q96R09 309 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 ZNF559Q9BR84 538 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 TRIM2Q9C040 744 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 TIGARQ9NQ88 270 aa18.21■□□□□ 0.51
PTCD3-220ENST00000627371 MCTS1Q9ULC4 181 aaKnown RBP18.21■□□□□ 0.51
PTCD3-220ENST00000627371 A0A1W2PNR3 127 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 TMEM72A0PK05 275 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 TMEM229AB2RXF0 380 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 TPST2O60704 377 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 FMO6PO60774 539 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 FCGR2AP12318 317 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 HSD17B1P14061 328 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 GGT1P19440 569 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 CCNA2P20248 432 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 HTR1EP28566 365 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 CDSNQ15517 529 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 CYBRD1Q53TN4 286 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 ATG4DQ86TL0 474 aaPredicted RBP18.2■□□□□ 0.5
PTCD3-220ENST00000627371 RNF148Q8N7C7 305 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 OR6T1Q8NGN1 323 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 PROX1Q92786 737 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 CPNE4Q96A23 557 aaPredicted RBP18.2■□□□□ 0.5
PTCD3-220ENST00000627371 PSMG3-AS1Q96PY0 264 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 CDRT15Q96T59 188 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 SRXN1Q9BYN0 137 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 C12orf10Q9HB07 376 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 RPS6KB2Q9UBS0 482 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 PACSIN3Q9UKS6 424 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 SLC9A8Q9Y2E8 581 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 HDGFL3Q9Y3E1 203 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 HCFC1P51610 2035 aa18.2■□□□□ 0.5
PTCD3-220ENST00000627371 A0A1B0GWA3 101 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 UBOX5O94941 541 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 SYNGR4O95473 234 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 CLDN14O95500 239 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 TMIGD3P0DMS9 266 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-220ENST00000627371 TFPIP10646 304 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 CXCR1P25024 350 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 RAC3P60763 192 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 NPTX1Q15818 432 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 FXNQ16595 210 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 ZNF239Q16600 458 aaKnown RBP18.19■□□□□ 0.5
PTCD3-220ENST00000627371 SPATS1Q496A3 300 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 OR2A2Q6IF42 318 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 C6orf89Q6UWU4 347 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 TMPPEQ6ZT21 453 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 OR4D11Q8NGI4 311 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 VANGL1Q8TAA9 524 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-220ENST00000627371 CA5BP1Q8WTZ4 195 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 DNAJA4Q8WW22 397 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-220ENST00000627371 DDIT4LQ96D03 193 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 PRR14Q9BWN1 585 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 OR11A1Q9GZK7 315 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 RNF122Q9H9V4 155 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 TMEM27Q9HBJ8 222 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 CD300AQ9UGN4 299 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 EGFL7Q9UHF1 273 aa18.19■□□□□ 0.5
PTCD3-220ENST00000627371 AQP8O94778 261 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 CTSSP25774 331 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 DIO1P49895 249 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 SELENOWP63302 87 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 MYBPHQ13203 477 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 OR1Q1Q15612 314 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 PPP4R4Q6NUP7 873 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 RINLQ6ZS11 566 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 CARM1Q86X55 608 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 FAM156AQ8NDB6 213 aa18.18■□□□□ 0.5
PTCD3-220ENST00000627371 LILRB4Q8NHJ6 448 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms