RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 TAS2R1Q9NYW7 299 aa16.7■□□□□ 0.26
CIRBP-245ENST00000621399 SLC9A8Q9Y2E8 581 aa16.7■□□□□ 0.26
CIRBP-245ENST00000621399 CXCL13O43927 109 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 ZNF682O95780 498 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 SERPINA1P01009 418 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 MSX2P35548 267 aaPredicted RBP16.69■□□□□ 0.26
CIRBP-245ENST00000621399 MAP2K6P52564 334 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 SELENOWP63302 87 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 CBX1P83916 185 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 CEACAM7Q14002 265 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 SYT14P1Q58G82 188 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 PPP4R4Q6NUP7 873 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 PLXDC2Q6UX71 529 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 SEM1Q6ZVN7 128 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 P4HA3Q7Z4N8 544 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 RBM45Q8IUH3 476 aaKnown RBP16.69■□□□□ 0.26
CIRBP-245ENST00000621399 OSTF1Q92882 214 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 WNT2BQ93097 391 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 C3orf49Q96BT1 292 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 UCN2Q96RP3 112 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 MCHR1Q99705 422 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 TIGARQ9NQ88 270 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 HIVEP3Q5T1R4 2406 aa16.69■□□□□ 0.26
CIRBP-245ENST00000621399 HECTD1Q9ULT8 2610 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 USP9XQ93008 2570 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-245ENST00000621399 A0A1B0GWA3 101 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 TMEM72A0PK05 275 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 WIPF3A6NGB9 483 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 SLC22A20A6NK97 555 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 TMEM229AB2RXF0 380 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 TPST2O60704 377 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 FMO6PO60774 539 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 IL2RAP01589 272 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 TNFRSF1BP20333 461 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 TIMP3P35625 211 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 PON3Q15166 354 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 OR1Q1Q15612 314 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 NPTX1Q15818 432 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 RIPPLY2Q5TAB7 128 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 MRGPRGQ86SM5 289 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 CARM1Q86X55 608 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 ARHGAP24Q8N264 748 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 OR4D11Q8NGI4 311 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 RNF217Q8TC41 542 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 DDIT4LQ96D03 193 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 TM9SF2Q99805 663 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 PRRG4Q9BZD6 226 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 OR11A1Q9GZK7 315 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 COQ3Q9NZJ6 369 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 SELENONQ9NZV5 590 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 CLCF1Q9UBD9 225 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 MAGEL2Q9UJ55 1249 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 HEATR5AQ86XA9 2040 aa16.68■□□□□ 0.26
CIRBP-245ENST00000621399 A0A1W2PNR3 127 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 MBD3L4A6NDZ8 208 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 MBD3L3A6NE82 208 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 MBD3L5A6NJ08 208 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 CYSRT1A8MQ03 144 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 GYG2O15488 501 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 ZNF208O43345 1280 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 TOXO94900 526 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 SYNGR4O95473 234 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 TGM6O95932 706 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 RNF224P0DH78 156 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 OR1E2P47887 323 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 CLK1P49759 484 aaKnown RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 ULK3Q6PHR2 472 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 CBLL1Q75N03 491 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 ATG4DQ86TL0 474 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 CCDC71Q8IV32 467 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 C9orf106Q8NAJ2 232 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 MBD3L2Q8NHZ7 208 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 FNDC9Q8TBE3 224 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 DNAJA4Q8WW22 397 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 PCDHAC1Q9H158 963 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 GORASP2Q9H8Y8 452 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 RPS6KA6Q9UK32 745 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 MCTS1Q9ULC4 181 aaKnown RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 PRPF19Q9UMS4 504 aaKnown RBP16.67■□□□□ 0.26
CIRBP-245ENST00000621399 RNF6Q9Y252 685 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 ZNF175Q9Y473 711 aa16.67■□□□□ 0.26
CIRBP-245ENST00000621399 A0A0G2JNJ9 132 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 ELOA3DA6NLF2 546 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-245ENST00000621399 CPSF4LA6NMK7 179 aaKnown RBP16.66■□□□□ 0.26
CIRBP-245ENST00000621399 HSPB2A8KAH6 182 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 PNMTP11086 282 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 BNIP1Q12981 228 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 BNIP2Q12982 314 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 HSPB2Q16082 182 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 FXNQ16595 210 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 ELOA3BQ3SY89 546 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 DNAL1Q4LDG9 190 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 ALG10BQ5I7T1 473 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 ENTPD8Q5MY95 495 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 C6orf89Q6UWU4 347 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 TMPPEQ6ZT21 453 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 FKBP9P1Q75LS8 142 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 VTCN1Q7Z7D3 282 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 LSRQ86X29 649 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-245ENST00000621399 ZNF808Q8N4W9 903 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms