RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 HDGFL3Q9Y3E1 203 aa17.09■□□□□ 0.33
CTSA-217ENST00000607482 ABCA4P78363 2273 aa17.09■□□□□ 0.33
CTSA-217ENST00000607482 A0A0G2JPF8 293 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 HNRNPCL2B2RXH8 293 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 HNRNPCL3B7ZW38 293 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 CLIC1O00299 241 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 SMAD9O15198 467 aaKnown RBP17.08■□□□□ 0.32
CTSA-217ENST00000607482 HNRNPCL1O60812 293 aaKnown RBP17.08■□□□□ 0.32
CTSA-217ENST00000607482 HNRNPCL4P0DMR1 293 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 PSMB1P20618 241 aaKnown RBP17.08■□□□□ 0.32
CTSA-217ENST00000607482 TACR3P29371 465 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 SLC1A3P43003 542 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 ZSWIM7Q19AV6 140 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 AP1ARQ63HQ0 302 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 TGIF2LYQ8IUE0 185 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 P3H2Q8IVL5 708 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 S100PBPQ96BU1 408 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 CCL19Q99731 98 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 PSD2Q9BQI7 771 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 NAA11Q9BSU3 229 aaPredicted RBP17.08■□□□□ 0.32
CTSA-217ENST00000607482 OR11A1Q9GZK7 315 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 OR10A4Q9H209 315 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 CXXC4Q9H2H0 198 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 VIPAS39Q9H9C1 493 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 BCO1Q9HAY6 547 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 PCDHB14Q9Y5E9 798 aa17.08■□□□□ 0.32
CTSA-217ENST00000607482 ZNF724A8MTY0 619 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 ARHGEF9O43307 516 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 SMPD2O60906 423 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 PMS2P2O95744 297 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 TFPTP0C1Z6 253 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 KLK2P20151 261 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 SLC35A1P78382 337 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 ACKR1Q16570 336 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 GTDC1Q4AE62 458 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 SFRP5Q5T4F7 317 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 VRK2Q86Y07 508 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 ADGRG3Q86Y34 549 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 PIGXQ8TBF5 258 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 HSD17B8Q92506 261 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 SPDL1Q96EA4 605 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 PLPPR2Q96GM1 343 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 USB1Q9BQ65 265 aaKnown RBP17.07■□□□□ 0.32
CTSA-217ENST00000607482 EBF4Q9BQW3 602 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 RABEP2Q9H5N1 569 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 RLIMQ9NVW2 624 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 TMEM181Q9P2C4 612 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 NOSIPQ9Y314 301 aaKnown RBP17.07■□□□□ 0.32
CTSA-217ENST00000607482 IFT52Q9Y366 437 aa17.07■□□□□ 0.32
CTSA-217ENST00000607482 HRNRQ86YZ3 2850 aaPredicted RBP17.07■□□□□ 0.32
CTSA-217ENST00000607482 HEATR5AQ86XA9 2040 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 A0A096LPI6 279 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.06■□□□□ 0.32
CTSA-217ENST00000607482 GPR171O14626 319 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 EIF1BO60739 113 aaKnown RBP17.06■□□□□ 0.32
CTSA-217ENST00000607482 GKN3PP0CG01 181 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 PPIBP23284 216 aaKnown RBP17.06■□□□□ 0.32
CTSA-217ENST00000607482 OR3A2P47893 321 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 MAP2K6P52564 334 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 EPS8Q12929 822 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 FADDQ13158 208 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 ITGADQ13349 1161 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 RGNQ15493 299 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 TSC22D1Q15714 1073 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 STK11Q15831 433 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 AGKQ53H12 422 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 ZNF311Q5JNZ3 666 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 RPS26P11Q5JNZ5 115 aaPredicted RBP17.06■□□□□ 0.32
CTSA-217ENST00000607482 ZNF836Q6ZNA1 936 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 C20orf204Q6ZNR8 217 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 BHLHA15Q7RTS1 189 aaPredicted RBP17.06■□□□□ 0.32
CTSA-217ENST00000607482 GTF2H4Q92759 462 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 MUCL1Q96DR8 90 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 TMEM19Q96HH6 336 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 ZNF300Q96RE9 604 aaPredicted RBP17.06■□□□□ 0.32
CTSA-217ENST00000607482 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.06■□□□□ 0.32
CTSA-217ENST00000607482 OSGIN1Q9UJX0 560 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 TRIM33Q9UPN9 1127 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 ZNF443Q9Y2A4 671 aaPredicted RBP17.06■□□□□ 0.32
CTSA-217ENST00000607482 HIVEP1P15822 2718 aa17.06■□□□□ 0.32
CTSA-217ENST00000607482 MAP1AP78559 2803 aaPredicted RBP17.05■□□□□ 0.32
CTSA-217ENST00000607482 CDHR4A6H8M9 788 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 SIAH2O43255 324 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 ZNF208O43345 1280 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 DNPH1O43598 174 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 THBDP07204 575 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 CD53P19397 219 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 RPS4Y1P22090 263 aaKnown RBP17.05■□□□□ 0.32
CTSA-217ENST00000607482 IRX1P78414 480 aaPredicted RBP17.05■□□□□ 0.32
CTSA-217ENST00000607482 NKX6-1P78426 367 aaPredicted RBP17.05■□□□□ 0.32
CTSA-217ENST00000607482 SQLEQ14534 574 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 WBP2NLQ6ICG8 309 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 BLOC1S3Q6QNY0 202 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 Q6ZT83 130 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 GABRG1Q8N1C3 465 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 APH1AQ96BI3 265 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 THOC1Q96FV9 657 aaKnown RBP17.05■□□□□ 0.32
CTSA-217ENST00000607482 ARL5BQ96KC2 179 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 MAGEB18Q96M61 343 aa17.05■□□□□ 0.32
CTSA-217ENST00000607482 ESRP2Q9H6T0 727 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms