RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 OPN1LWP04000 364 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 SLC6A2P23975 617 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 SLC7A1P30825 629 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 ACAA2P42765 397 aaKnown RBP14.46□□□□□ -0.09
LSM4-206ENST00000600289 POLR2HP52434 150 aaKnown RBP14.46□□□□□ -0.09
LSM4-206ENST00000600289 AGFG1P52594 562 aaKnown RBP14.46□□□□□ -0.09
LSM4-206ENST00000600289 PCBP3P57721 371 aaKnown RBP14.46□□□□□ -0.09
LSM4-206ENST00000600289 MTPNP58546 118 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 SCARB2Q14108 478 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 RNPS1Q15287 305 aaKnown RBP14.46□□□□□ -0.09
LSM4-206ENST00000600289 GTF2IRD2BQ6EKJ0 949 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 VWA1Q6PCB0 445 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 DHRS4L2Q6PKH6 230 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 GTF2IRD2Q86UP8 949 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 ADGRG3Q86Y34 549 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 KIF18BQ86Y91 864 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 PTOV1Q86YD1 416 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 SLC30A8Q8IWU4 369 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 CLIP4Q8N3C7 705 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 C11orf65Q8NCR3 313 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 HIPK4Q8NE63 616 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 BHLHE22Q8NFJ8 381 aaPredicted RBP14.46□□□□□ -0.09
LSM4-206ENST00000600289 OR8J3Q8NGG0 315 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 OR6K3Q8NGY3 331 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 TMUB1Q9BVT8 246 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 SRXN1Q9BYN0 137 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 PRRG4Q9BZD6 226 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 ADAM19Q9H013 955 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 EVA1AQ9H8M9 152 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 HDGFL3Q9Y3E1 203 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 MPDZO75970 2070 aa14.46□□□□□ -0.09
LSM4-206ENST00000600289 PRORSD1PA6NEY8 169 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 CCDC22O60826 627 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 UQCRC1P31930 480 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 LSP1P33241 339 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 CSNK2A1P68400 391 aaPredicted RBP14.45□□□□□ -0.1
LSM4-206ENST00000600289 CYLC2Q14093 348 aaPredicted RBP14.45□□□□□ -0.1
LSM4-206ENST00000600289 SELPLGQ14242 412 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 REP15Q6BDI9 236 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 WBP2NLQ6ICG8 309 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 SPATA21Q7Z572 469 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 SLC43A2Q8N370 569 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 CNEP1R1Q8N9A8 125 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 PCYOX1LQ8NBM8 494 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 LRRC58Q96CX6 371 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 ZNF607Q96SK3 696 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 SH3GL1Q99961 368 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 TACO1Q9BSH4 297 aaKnown RBP14.45□□□□□ -0.1
LSM4-206ENST00000600289 RBM24Q9BX46 236 aaKnown RBP14.45□□□□□ -0.1
LSM4-206ENST00000600289 OSGIN1Q9UJX0 560 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 ANGPT4Q9Y264 503 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 EMC9Q9Y3B6 208 aa14.45□□□□□ -0.1
LSM4-206ENST00000600289 TMED7-TICAM2A0A0A6YYA0 188 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 A0A1W2PNR3 127 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 MRASO14807 208 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 PMS2P2O95744 297 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 AGTR1P30556 359 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 DIO1P49895 249 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 GZMMP51124 257 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 SF3A3Q12874 501 aaKnown RBP eCLIP14.44□□□□□ -0.1
LSM4-206ENST00000600289 CYP51A1Q16850 503 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 MMEL1Q495T6 779 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 NANOGP8Q6NSW7 305 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 TMPPEQ6ZT21 453 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 FCRLAQ7L513 359 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 BTLAQ7Z6A9 289 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 SNX32Q86XE0 403 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 RP9Q8TA86 221 aaKnown RBP14.44□□□□□ -0.1
LSM4-206ENST00000600289 REXO5Q96IC2 774 aaKnown RBP14.44□□□□□ -0.1
LSM4-206ENST00000600289 RSPO3Q9BXY4 272 aaPredicted RBP14.44□□□□□ -0.1
LSM4-206ENST00000600289 NSRP1Q9H0G5 558 aaKnown RBP14.44□□□□□ -0.1
LSM4-206ENST00000600289 NANOGQ9H9S0 305 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 PLSCR4Q9NRQ2 329 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 GALNT8Q9NY28 637 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 KLHL13Q9P2N7 655 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 TMED7Q9Y3B3 224 aa14.44□□□□□ -0.1
LSM4-206ENST00000600289 HRNRQ86YZ3 2850 aaPredicted RBP14.44□□□□□ -0.1
LSM4-206ENST00000600289 SMAD9O15198 467 aaKnown RBP14.43□□□□□ -0.1
LSM4-206ENST00000600289 CYTIPO60759 359 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 SERPINB7O75635 380 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 PLGP00747 810 aaPredicted RBP14.43□□□□□ -0.1
LSM4-206ENST00000600289 GKN3PP0CG01 181 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 ENPP1P22413 925 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 TACR3P29371 465 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 PCGF2P35227 344 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 CPA2P48052 419 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 SEC24CP53992 1094 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 CTBP2P56545 445 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 COPZ1P61923 177 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 SIRPAP78324 504 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 CAPRIN1Q14444 709 aaKnown RBP14.43□□□□□ -0.1
LSM4-206ENST00000600289 LUZP2Q86TE4 346 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 CALHM3Q86XJ0 350 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 ZZZ3Q8IYH5 903 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 ATP6V1C2Q8NEY4 427 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 FAM222BQ8WU58 562 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 ROBO4Q8WZ75 1007 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 DDIT4LQ96D03 193 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 OR5B2Q96R09 309 aa14.43□□□□□ -0.1
LSM4-206ENST00000600289 BCO1Q9HAY6 547 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms