RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ABCD2Q9UBJ2 740 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 RPS6KB2Q9UBS0 482 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 OSGIN1Q9UJX0 560 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 MCTS1Q9ULC4 181 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 TMED7Q9Y3B3 224 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 A0A1W2PNR3 127 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 FAM90A27PA6NNH2 459 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 SYT5O00445 386 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 TGM6O95932 706 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 IFNA14P01570 189 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 TMIGD3P0DMS9 266 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 CXCR1P25024 350 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 KCNJ5P48544 419 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 CARD18P57730 90 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 DUSP7Q16829 419 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 LRRC23Q53EV4 343 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 SYT14P1Q58G82 188 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 C16orf89Q6UX73 402 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 ADGRG3Q86Y34 549 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 PGAM4Q8N0Y7 254 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 FNDC9Q8TBE3 224 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 OSTF1Q92882 214 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 ZFP3Q96NJ6 502 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 KCTD14Q9BQ13 255 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 TESQ9UGI8 421 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 HCFC1P51610 2035 aa17.65■□□□□ 0.42
SHKBP1-214ENST00000597396 LGI1O95970 557 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 C8BP07358 591 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 FCGR2AP12318 317 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 CD247P20963 164 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 FKBP2P26885 142 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 ZNF136P52737 540 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 SLC25A3Q00325 362 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 OR2A2Q6IF42 318 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 RANBP3LQ86VV4 465 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 NAXEQ8NCW5 288 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 GPR32P1Q8NGA4 272 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 OR52E4Q8NGH9 312 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 ZNF559Q9BR84 538 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 TRIM2Q9C040 744 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 ADAM19Q9H013 955 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 COQ10BQ9H8M1 238 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 TMEM181Q9P2C4 612 aa17.64■□□□□ 0.41
SHKBP1-214ENST00000597396 UNC79Q9P2D8 2635 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 TMEM72A0PK05 275 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 M0R3H8 397 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 DVL2O14641 736 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 RCBTB2O95199 551 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 FESP07332 822 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 CTSSP25774 331 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 KDELR2P33947 212 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 CDSNQ15517 529 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 NRF1Q16656 503 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 MAMDC2Q7Z304 686 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 LURAP1LQ8IV03 231 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 GCNT2Q8N0V5 402 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 LILRB4Q8NHJ6 448 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 VANGL1Q8TAA9 524 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 PROX1Q92786 737 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 CPNE4Q96A23 557 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 C3orf49Q96BT1 292 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 INTS12Q96CB8 462 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 DDIT4LQ96D03 193 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 ARHGDIGQ99819 225 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 TMEM27Q9HBJ8 222 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 BAG5Q9UL15 447 aa17.63■□□□□ 0.41
SHKBP1-214ENST00000597396 TEX15Q9BXT5 2789 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 B2RBV5 119 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 CXCR6O00574 342 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 ZNF208O43345 1280 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 CLDN1O95832 211 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 BMP5P22003 454 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 CALB2P22676 271 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 HTR2AP28223 471 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 CLK1P49759 484 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 MAP2K6P52564 334 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 CRYBA2P53672 197 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 CYBRD1Q53TN4 286 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 TRPM8Q7Z2W7 1104 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 DEFB107AQ8IZN7 70 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 MCHR1Q99705 422 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 PRR14Q9BWN1 585 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 SRXN1Q9BYN0 137 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 OR11A1Q9GZK7 315 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 KCNJ16Q9NPI9 418 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 SELENONQ9NZV5 590 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 SLC9A8Q9Y2E8 581 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 HDGFL3Q9Y3E1 203 aa17.62■□□□□ 0.41
SHKBP1-214ENST00000597396 A0A1B0GWA3 101 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 ELOA3DA6NLF2 546 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 PRSS44E7EML9 344 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 SULT2B1O00204 365 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 GMNNO75496 209 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 AQP8O94778 261 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 OPRM1P35372 400 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 DIO1P49895 249 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 RAC3P60763 192 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 CSNK2A1P68400 391 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 ZNF239Q16600 458 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 SLC25A35Q3KQZ1 300 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms