RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 BCKDHAP12694 445 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 KRT4P19013 534 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 PRPH2P23942 346 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 PCSK6P29122 969 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 ALDH3A1P30838 453 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 ARRB2P32121 409 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 SFTPDP35247 375 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 FRKP42685 505 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 CCT5P48643 541 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 PSMD4P55036 377 aaKnown RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 NR1H2P55055 460 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 CTBP2P56545 445 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 FOXF1Q12946 379 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 PDE7AQ13946 482 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 LASP1Q14847 261 aaKnown RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 TOMM34Q15785 309 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 CCDC153Q494R4 210 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 CPTPQ5TA50 214 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 LIPMQ5VYY2 423 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 LRIG3Q6UXM1 1119 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 STAC2Q6ZMT1 411 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 ZNF704Q6ZNC4 412 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 ZCCHC23Q6ZST2 131 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 OLIG3Q7RTU3 272 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 NUFIP2Q7Z417 695 aaKnown RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 PRIMA1Q86XR5 153 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 DDIASQ8IXT1 998 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 ZNF619Q8N2I2 560 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 GTPBP8Q8N3Z3 284 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 COX18Q8N8Q8 333 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 CDRT4Q8N9R6 151 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 C1orf162Q8NEQ5 155 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 ATP6V1C2Q8NEY4 427 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 OR7A2PQ8NGA2 310 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 CEP70Q8NHQ1 597 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 B4GALNT2Q8NHY0 566 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 KIF18AQ8NI77 898 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 JADE3Q92613 823 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 CDS1Q92903 461 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 GCDHQ92947 438 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 PIGTQ969N2 578 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 FAM120BQ96EK7 910 aaKnown RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 CHMP6Q96FZ7 201 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 C20orf173Q96LM9 149 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 PIP5K1AQ99755 562 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 CCT7Q99832 543 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 C1orf50Q9BV19 199 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 SRXN1Q9BYN0 137 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 PLSCR4Q9NRQ2 329 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 SIRT3Q9NTG7 399 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 SLC17A7Q9P2U7 560 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 DNAJC15Q9Y5T4 150 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 FLNAP21333 2647 aaKnown RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 A0A087WZY1 265 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 UQCRHLA0A096LP55 91 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 IGHV3-15A0A0B4J1V0 119 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 H3BQF6 201 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ADAMDEC1O15204 470 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 TBX19O60806 448 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 PEX11AO75192 247 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 SPAG7O75391 227 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 SLU7O95391 586 aaKnown RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 SYNGR4O95473 234 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 HMGN2P05204 90 aaKnown RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 HNRNPCP07910 306 aaKnown RBP eCLIP5.53□□□□□ -1.52
NUP88-212ENST00000576708 NGFRP08138 427 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 IFI6P09912 130 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 LINGO3P0C6S8 592 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 FCGR2AP12318 317 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 CREB1P16220 341 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ZNF17P17021 662 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 FPR1P21462 350 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 AGTR1P30556 359 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 PTH2RP49190 550 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 PCYT1AP49585 367 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ZNF41P51814 821 aaPredicted RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 CARD18P57730 90 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 POU6F2P78424 691 aaPredicted RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 ZNF117Q03924 483 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ZNF844Q08AG5 666 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 FGFBP1Q14512 234 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 UGT3A2Q3SY77 523 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 VPS26BQ4G0F5 336 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 HSP90B2PQ58FF3 399 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 ARL13AQ5H913 290 aaPredicted RBP5.53□□□□□ -1.52
NUP88-212ENST00000576708 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.53□□□□□ -1.52
NUP88-212ENST00000576708 HBMQ6B0K9 141 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 CDC73Q6P1J9 531 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 CFAP161Q6P656 301 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 CBLN3Q6UW01 205 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 PLEKHM3Q6ZWE6 761 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 TDRPQ86YL5 185 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 LRRC75A-AS1Q8N1F1 130 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 CLEC4FQ8N1N0 589 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 KRTCAP2Q8N6L1 136 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 NKAIN3Q8N8D7 197 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 MAPK1IP1LQ8NDC0 245 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 PIK3C3Q8NEB9 887 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 OR6Y1Q8NGX8 325 aa5.53□□□□□ -1.52
NUP88-212ENST00000576708 OR6K3Q8NGY3 331 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms