RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 CRATP43155 626 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 ANXA11P50995 505 aaKnown RBP12.18□□□□□ -0.46
RAB40B-204ENST00000571554 MVDP53602 400 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 SLC18A1P54219 525 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 NR1H2P55055 460 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 CSNK2A1P68400 391 aaPredicted RBP12.18□□□□□ -0.46
RAB40B-204ENST00000571554 C6orf10Q5SRN2 563 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 SHEQ5VZ18 495 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 ABLIM2Q6H8Q1 611 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 C20orf204Q6ZNR8 217 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 YTHDF3Q7Z739 585 aaKnown RBP12.18□□□□□ -0.46
RAB40B-204ENST00000571554 MTDHQ86UE4 582 aaKnown RBP12.18□□□□□ -0.46
RAB40B-204ENST00000571554 CCDC103Q8IW40 242 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 ZNF100Q8IYN0 542 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 CIARTQ8N365 385 aaPredicted RBP12.18□□□□□ -0.46
RAB40B-204ENST00000571554 GLB1L3Q8NCI6 653 aaPredicted RBP12.18□□□□□ -0.46
RAB40B-204ENST00000571554 AKAP1Q92667 903 aaKnown RBP eCLIP12.18□□□□□ -0.46
RAB40B-204ENST00000571554 NEUROG1Q92886 237 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 Q96MF0 132 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 PIP5K1AQ99755 562 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 GP6Q9HCN6 339 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 EXOSC3Q9NQT5 275 aaKnown RBP12.18□□□□□ -0.46
RAB40B-204ENST00000571554 TMED7Q9Y3B3 224 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 SPIN1Q9Y657 262 aaPredicted RBP12.18□□□□□ -0.46
RAB40B-204ENST00000571554 USH1CQ9Y6N9 552 aa12.18□□□□□ -0.46
RAB40B-204ENST00000571554 ZC3H12DA2A288 527 aaKnown RBP12.17□□□□□ -0.46
RAB40B-204ENST00000571554 TRIM64A6NGJ6 449 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 TRIM64BA6NI03 449 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 HS3ST1O14792 307 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 SMAD7O15105 426 aaKnown RBP12.17□□□□□ -0.46
RAB40B-204ENST00000571554 ARHGEF9O43307 516 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 RPS4Y1P22090 263 aaKnown RBP12.17□□□□□ -0.46
RAB40B-204ENST00000571554 IGHV1-2P23083 117 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 TACR3P29371 465 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 ADSLP30566 484 aaPredicted RBP12.17□□□□□ -0.46
RAB40B-204ENST00000571554 POLR2JP52435 117 aaKnown RBP12.17□□□□□ -0.46
RAB40B-204ENST00000571554 DSTNP60981 165 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 ITGADQ13349 1161 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 GSTA3Q16772 222 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 SLC2A7Q6PXP3 512 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 ZNF836Q6ZNA1 936 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 Q6ZT83 130 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 GALNT5Q7Z7M9 940 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 UBE2J2Q8N2K1 259 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 MIER2Q8N344 545 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 ZHX1-C8orf76Q96EF9 292 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 C18orf12Q96KH6 178 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 HDHD5Q9BXW7 423 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 OR10A4Q9H209 315 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 MTHFD2LQ9H903 347 aaPredicted RBP12.17□□□□□ -0.46
RAB40B-204ENST00000571554 TPT1P8Q9HAU6 139 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 SLCO1B3Q9NPD5 702 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 SDR39U1Q9NRG7 319 aaPredicted RBP12.17□□□□□ -0.46
RAB40B-204ENST00000571554 ZIM2Q9NZV7 527 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 P2RX2Q9UBL9 471 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 OSGIN1Q9UJX0 560 aa12.17□□□□□ -0.46
RAB40B-204ENST00000571554 ZNF716A6NP11 495 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 ZNF724A8MTY0 619 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 H7C1Q1 480 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 PMS2P2O95744 297 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 DBIP07108 87 aaKnown RBP12.16□□□□□ -0.46
RAB40B-204ENST00000571554 INHBBP09529 407 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 NUDT7P0C024 238 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 IMPDH2P12268 514 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 FOSL1P15407 271 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 NTF4P34130 210 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 PTH2RP49190 550 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 POLR2HP52434 150 aaKnown RBP12.16□□□□□ -0.46
RAB40B-204ENST00000571554 LRRC74AQ0VAA2 488 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 EPS8Q12929 822 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 P2RY6Q15077 328 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 AGBL2Q5U5Z8 902 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 AP1ARQ63HQ0 302 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 ADAM5Q6NVV9 412 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 EPGNQ6UW88 154 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 SEZ6L2Q6UXD5 910 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 CMIPQ8IY22 773 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 PEX5LQ8IYB4 626 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 CADM2Q8N3J6 435 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 KBTBD8Q8NFY9 601 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 OR52P1PQ8NH57 321 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 LILRB1Q8NHL6 650 aaPredicted RBP12.16□□□□□ -0.46
RAB40B-204ENST00000571554 SLC38A5Q8WUX1 472 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 TMEM171Q8WVE6 324 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 OIT3Q8WWZ8 545 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 POM121Q96HA1 1249 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 TMEM19Q96HH6 336 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 ITCHQ96J02 903 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 EBF4Q9BQW3 602 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 POTEKPQ9BYX7 375 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 RMND5AQ9H871 391 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 LAMP3Q9UQV4 416 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 ZNF443Q9Y2A4 671 aaPredicted RBP12.16□□□□□ -0.46
RAB40B-204ENST00000571554 NOSIPQ9Y314 301 aaKnown RBP12.16□□□□□ -0.46
RAB40B-204ENST00000571554 HDGFL3Q9Y3E1 203 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 RNF115Q9Y4L5 304 aa12.16□□□□□ -0.46
RAB40B-204ENST00000571554 NIPBLQ6KC79 2804 aaeCLIP12.15□□□□□ -0.46
RAB40B-204ENST00000571554 USF3Q68DE3 2245 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms