RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LCORQ96JN0 433 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ART5Q96L15 291 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 PTCHD1Q96NR3 888 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 WDFY2Q96P53 400 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TEAD3Q99594 435 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TIMP4Q99727 224 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TMEM43Q9BTV4 400 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 DUSP23Q9BVJ7 150 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 DPH1Q9BZG8 443 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 LAT2Q9GZY6 243 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ADAM19Q9H013 955 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 NUAK2Q9H093 628 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 CLEC4MQ9H2X3 399 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF768Q9H5H4 540 aaKnown RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 RNF167Q9H6Y7 350 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 SYNDIG1Q9H7V2 258 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 MCCC2Q9HCC0 563 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF304Q9HCX3 659 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 MKKSQ9NPJ1 570 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TXNL4BQ9NX01 149 aaKnown RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 SOHLH2Q9NX45 425 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ERVK13-1Q9NX77 482 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 BABAM2Q9NXR7 383 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TNFRSF10DQ9UBN6 386 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 IL20RAQ9UHF4 553 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ERVK-19Q9WJR5 959 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 DTX4Q9Y2E6 619 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 CARD8Q9Y2G2 431 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 GSTK1Q9Y2Q3 226 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 GPR52Q9Y2T5 361 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 CACNA1IQ9P0X4 2223 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 DNAH14Q0VDD8 3507 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TMEM131Q92545 1883 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 DMDP11532 3685 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 IGLV3-12A0A075B6K2 115 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 IQCMA0A1B0GVH7 501 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 C2orf92A0A1B0GVN3 265 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 A0A1B0GVT2 93 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 A0A1W2PQD3 144 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 CCDC182A6NF36 153 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 OR2W5A6NFC9 320 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 OR6C76A6NM76 312 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 RIIAD1A6NNX1 92 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 PRR23D1E9PI22 279 aaPredicted RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 WWP2O00308 870 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 SOCS6O14544 535 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 CTDSP2O14595 271 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 IMPA2O14732 288 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 SLC30A4O14863 429 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 PLD2O14939 933 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 SEC14L5O43304 696 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 EIF4E2O60573 245 aaKnown RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 TSPAN2O60636 221 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 CDC123O75794 336 aaPredicted RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 UPK1BO75841 260 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 NDUFB2O95178 105 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 SLC2A10O95528 541 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 CH25HO95992 272 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 CSTAP01040 98 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 PDGFBP01127 241 aaPredicted RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 IFNGP01579 166 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 HLA-DPB1P04440 258 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 IFNA16P05015 189 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 CD1AP06126 327 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 SBK2P0C263 348 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 ANKRD34CP0C6C1 535 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 OCM2P0CE71 109 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 OCMP0CE72 109 aaPredicted RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 PRR23D2P0DMB1 279 aaPredicted RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 TDGF1P13385 188 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 APEHP13798 732 aaKnown RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 FOLR1P15328 257 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 FUT1P19526 365 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 ALAS2P22557 587 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 GABRA5P31644 462 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 TNFSF8P32971 234 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 SOX3P41225 446 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 OR1D4P47884 311 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 SLC6A8P48029 635 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 ARRB1P49407 418 aaPredicted RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 RPS3AP61247 264 aaKnown RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 DMWDQ09019 674 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 KRR1Q13601 381 aaKnown RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 IL10RAQ13651 578 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 GALEQ14376 348 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 TRAM1Q15629 374 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 OR2G6Q5TZ20 316 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 LIPKQ5VXJ0 399 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 PLBD1Q6P4A8 553 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF322Q6U7Q0 402 aaPredicted RBP4.93□□□□□ -1.62
SF3B3-213ENST00000569687 KIRREL2Q6UWL6 708 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 TTLL10Q6ZVT0 673 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 OAFQ86UD1 273 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 LHFPL3Q86UP9 236 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 WDR5BQ86VZ2 330 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 GPR135Q8IZ08 494 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 PARP16Q8N5Y8 322 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF441Q8N8Z8 693 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 TEX19Q8NA77 164 aa4.93□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF527Q8NB42 609 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms