RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 TESQ9UGI8 421 aaKnown RBP11.65□□□□□ -0.54
CLK3-224ENST00000568605 ARL2BPQ9Y2Y0 163 aa11.65□□□□□ -0.54
CLK3-224ENST00000568605 TMED7Q9Y3B3 224 aa11.65□□□□□ -0.54
CLK3-224ENST00000568605 HDGFL3Q9Y3E1 203 aa11.65□□□□□ -0.54
CLK3-224ENST00000568605 NDUFAB1O14561 156 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 ZNF208O43345 1280 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 DNPH1O43598 174 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 CXCR1P25024 350 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 SHC1P29353 583 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 TACR3P29371 465 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 NUDT2P50583 147 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 PCBP3P57721 371 aaKnown RBP11.64□□□□□ -0.55
CLK3-224ENST00000568605 RGS8P57771 180 aaPredicted RBP11.64□□□□□ -0.55
CLK3-224ENST00000568605 RAC3P60763 192 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 ADRM1Q16186 407 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 VMACQ2NL98 169 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 ZNF787Q6DD87 383 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 PLXDC2Q6UX71 529 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 FCRLAQ7L513 359 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 FAM214BQ7L5A3 538 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 GDF7Q7Z4P5 450 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 RANBP3LQ86VV4 465 aaPredicted RBP11.64□□□□□ -0.55
CLK3-224ENST00000568605 PTOV1Q86YD1 416 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 ZZZ3Q8IYH5 903 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 SLC43A2Q8N370 569 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 OR6K3Q8NGY3 331 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 RNF128Q8TEB7 428 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 OSTF1Q92882 214 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 ENKD1Q9H0I2 346 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 GP6Q9HCN6 339 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 KLHL9Q9P2J3 617 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
CLK3-224ENST00000568605 A0A1W2PNR3 127 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 FAM220BPB1ANY3 271 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 C19orf84I3L1E1 186 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 SULT2B1O00204 365 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 MSTNO14793 375 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 AIM2O14862 343 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 EFNA2O43921 213 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 ADAM11O75078 769 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 SS18L1O75177 396 aaPredicted RBP11.63□□□□□ -0.55
CLK3-224ENST00000568605 TNFSF13O75888 250 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 SMNDC1O75940 238 aaKnown RBP eCLIP11.63□□□□□ -0.556e-7■■□□□ 13.7
CLK3-224ENST00000568605 AQP8O94778 261 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 PMS2P2O95744 297 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 IFNA14P01570 189 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 ENPP1P22413 925 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 PRDX6P30041 224 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 CPOXP36551 454 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 DIO1P49895 249 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 SIRPAP78324 504 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 SORDQ00796 357 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 FOXF2Q12947 444 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 RABL3Q5HYI8 236 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 TMEM201Q5SNT2 666 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 HIST2H2BCQ6DN03 193 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 HACD2Q6Y1H2 254 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 STK32CQ86UX6 486 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 CLIP4Q8N3C7 705 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 LRRC37BQ96QE4 947 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 ZNF559Q9BR84 538 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 MYLK2Q9H1R3 596 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 NPDC1Q9NQX5 325 aaPredicted RBP11.63□□□□□ -0.55
CLK3-224ENST00000568605 SELENONQ9NZV5 590 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 OSGIN1Q9UJX0 560 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 PROCRQ9UNN8 238 aa11.63□□□□□ -0.55
CLK3-224ENST00000568605 SYT5O00445 386 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 CD8BP10966 210 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 IGFBP2P18065 325 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 ACAA2P42765 397 aaKnown RBP11.62□□□□□ -0.55
CLK3-224ENST00000568605 AGFG1P52594 562 aaKnown RBP11.62□□□□□ -0.55
CLK3-224ENST00000568605 MYBPHQ13203 477 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 VEZF1Q14119 521 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 GKAP1Q5VSY0 366 aaPredicted RBP11.62□□□□□ -0.55
CLK3-224ENST00000568605 VWA1Q6PCB0 445 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 C5orf46Q6UWT4 87 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 TMPPEQ6ZT21 453 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 LUZP2Q86TE4 346 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 ADGRG3Q86Y34 549 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 OR2T12Q8NG77 320 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 OR52E4Q8NGH9 312 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 PIGXQ8TBF5 258 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 DNAJA4Q8WW22 397 aaPredicted RBP11.62□□□□□ -0.55
CLK3-224ENST00000568605 HOPXQ9BPY8 73 aaPredicted RBP11.62□□□□□ -0.55
CLK3-224ENST00000568605 RBM24Q9BX46 236 aaKnown RBP11.62□□□□□ -0.55
CLK3-224ENST00000568605 SRXN1Q9BYN0 137 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 TRIM2Q9C040 744 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 C12orf10Q9HB07 376 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 JKAMPQ9P055 326 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 TMEM181Q9P2C4 612 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 KLHL13Q9P2N7 655 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 KCNN3Q9UGI6 736 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 CHST2Q9Y4C5 530 aa11.62□□□□□ -0.55
CLK3-224ENST00000568605 ELOA3DA6NLF2 546 aaPredicted RBP11.61□□□□□ -0.55
CLK3-224ENST00000568605 FRS3O43559 492 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 EIF1BO60739 113 aaKnown RBP11.61□□□□□ -0.55
CLK3-224ENST00000568605 PRKD3O94806 890 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 MFN2O95140 757 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 OPN1SWP03999 348 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 FESP07332 822 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms