RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 AIG1Q9NVV5 245 aa9.73□□□□□ -0.85
UBFD1-205ENST00000566136 SLAMF8Q9P0V8 285 aa9.73□□□□□ -0.85
UBFD1-205ENST00000566136 MEMO1Q9Y316 297 aa9.73□□□□□ -0.85
UBFD1-205ENST00000566136 IRAK3Q9Y616 596 aa9.73□□□□□ -0.85
UBFD1-205ENST00000566136 PIKFYVEQ9Y2I7 2098 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ZDBF2Q9HCK1 2354 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 TMEM210A6NLX4 147 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 TPST1O60507 370 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ERN1O75460 977 aaKnown RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 SMIM18P0DKX4 95 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 DCTDP32321 178 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 CD70P32970 193 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 NKX2-1P43699 371 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 KCNK10P57789 538 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ZXDAP98168 799 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 TIGD2Q4W5G0 525 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 LIN52Q52LA3 116 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 XKR7Q5GH72 579 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 FAM69BQ5VUD6 431 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 CES5AQ6NT32 575 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 MDGA2Q7Z553 956 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 SATL1Q86VE3 508 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 CACUL1Q86Y37 369 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 FGFRL1Q8N441 504 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ERLEC1Q96DZ1 483 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 DUS3LQ96G46 650 aaKnown RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 SLC29A1Q99808 456 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 C7orf50Q9BRJ6 194 aaKnown RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 HAUS8Q9BT25 410 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 Q9H521 79 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ACTL8Q9H568 366 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 SLC52A3Q9NQ40 469 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 HSFX1Q9UBD0 423 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 RAB26Q9ULW5 256 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ICKQ9UPZ9 632 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 DHRS7Q9Y394 339 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 OBSL1O75147 1896 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 A0A1B0GTW7 788 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 FAM149AA5PLN7 773 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 HAT1O14929 419 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 BCAS1O75363 584 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 H6PDO95479 791 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 CAPN1P07384 714 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 NELFEP18615 380 aaKnown RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 IL12AP29459 219 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 EIF2S3P41091 472 aaKnown RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ZFP36L2P47974 494 aaKnown RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 MYBPC1Q00872 1141 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 BCL2L1Q07817 233 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 UBE2V1Q13404 147 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 KEAP1Q14145 624 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 HLXQ14774 488 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 HIST2H2ACQ16777 129 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 SBSNQ6UWP8 590 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 RPTNQ6XPR3 784 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 GOLGA7Q7Z5G4 137 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 FAM47BQ8NA70 645 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 PLA2G15Q8NCC3 412 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.72□□□□□ -0.858e-6■■■□□ 18.3
UBFD1-205ENST00000566136 DGCR14Q96DF8 476 aaKnown RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 WWTR1Q9GZV5 400 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ELOVL6Q9H5J4 265 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 NUDT4Q9NZJ9 180 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ABCD2Q9UBJ2 740 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 WARS2Q9UGM6 360 aaKnown RBP9.72□□□□□ -0.85
UBFD1-205ENST00000566136 ZNF318Q5VUA4 2279 aa9.72□□□□□ -0.85
UBFD1-205ENST00000566136 MYO10Q9HD67 2058 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 M0R296 226 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 JRKO75564 520 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 SLC25A14O95258 325 aaPredicted RBP9.71□□□□□ -0.85
UBFD1-205ENST00000566136 DBHP09172 617 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 SP9P0CG40 484 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 ITPKBP27987 946 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 IL12BP29460 328 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 GDF5P43026 501 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 RPL26P61254 145 aaKnown RBP9.71□□□□□ -0.85
UBFD1-205ENST00000566136 AP1S1P61966 158 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 SIRPAP78324 504 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 NFATC2Q13469 925 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 ETFDHQ16134 617 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 OGFOD2Q6N063 350 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 FAM159AQ6UWV7 190 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 Q6ZSR9 355 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 STK40Q8N2I9 435 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 FAM83FQ8NEG4 500 aaPredicted RBP9.71□□□□□ -0.85
UBFD1-205ENST00000566136 OR4F6Q8NGB9 312 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 ZNF382Q96SR6 550 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 HOPXQ9BPY8 73 aaPredicted RBP9.71□□□□□ -0.85
UBFD1-205ENST00000566136 CENPKQ9BS16 269 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 GID8Q9NWU2 228 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 ELOVL2Q9NXB9 296 aa9.71□□□□□ -0.85
UBFD1-205ENST00000566136 A0A1W2PP18 115 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 C2CD4DB7Z1M9 353 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 OR7A17O14581 309 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 TRBC1P01850 177 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 PSMC3P17980 439 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 PPP3CCP48454 512 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 POLR2JP52435 117 aaKnown RBP9.71□□□□□ -0.86
UBFD1-205ENST00000566136 HERV-K104P63124 156 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 ZFP36L1Q07352 338 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms