RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 DSTNP60981 165 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 KEAP1Q14145 624 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 MAPRE2Q15555 327 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 TESK1Q15569 626 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 TSC22D1Q15714 1073 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 SLC25A53Q5H9E4 307 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 COQ5Q5HYK3 327 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 RPS26P11Q5JNZ5 115 aaPredicted RBP12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 PAMR1Q6UXH9 720 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 LRRC74BQ6ZQY2 392 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 C22orf34Q6ZV56 151 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 STK32CQ86UX6 486 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 RNF128Q8TEB7 428 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 FAM107BQ9H098 131 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 PLSCR4Q9NRQ2 329 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 GLRX2Q9NS18 164 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 ACER3Q9NUN7 267 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 CAPN7Q9Y6W3 813 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 PRR14LQ5THK1 2151 aa12.15□□□□□ -0.47
VPS9D1-204ENST00000565023 SULT2B1O00204 365 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 SIAH2O43255 324 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 PRKD3O94806 890 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 RAF1P04049 648 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 GPX2P18283 190 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 PLAURQ03405 335 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 RNPS1Q15287 305 aaKnown RBP12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 RUNDC3AQ59EK9 446 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 MRPL2Q5T653 305 aaKnown RBP12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 DHDDSQ86SQ9 333 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 VRK2Q86Y07 508 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 WFDC8Q8IUA0 241 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 FAM71CQ8NEG0 241 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 SLC38A5Q8WUX1 472 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 PMM1Q92871 262 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 CGREF1Q99674 301 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 CPPED1Q9BRF8 314 aaPredicted RBP12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 OR11A1Q9GZK7 315 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 IKZF5Q9H5V7 419 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 PLEKHF2Q9H8W4 249 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 UBTD1Q9HAC8 227 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 ARMCX1Q9P291 453 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 KLHL13Q9P2N7 655 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 P2RX2Q9UBL9 471 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 EDARQ9UNE0 448 aa12.14□□□□□ -0.47
VPS9D1-204ENST00000565023 AGAP5A6NIR3 686 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 BBIP1A8MTZ0 92 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 DEFB108AA8MXU0 73 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 EVPLLA8MZ36 301 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 SMAD9O15198 467 aaKnown RBP12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 ADAM11O75078 769 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 FESP07332 822 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 NUDT7P0C024 238 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 GKN3PP0CG01 181 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 CRYGSP22914 178 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 DIO1P49895 249 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 RAC3P60763 192 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 RASGEF1BQ0VAM2 473 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 NFYCQ13952 458 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 SYT14P1Q58G82 188 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 STAC2Q6ZMT1 411 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 BEND4Q6ZU67 534 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 PIGWQ7Z7B1 504 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 MTDHQ86UE4 582 aaKnown RBP12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 CXorf67Q86X51 503 aaPredicted RBP12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 SNX32Q86XE0 403 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 C10orf111Q8N326 155 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 NINJ1Q92982 152 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 ANKRD27Q96NW4 1050 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 ZNF300Q96RE9 604 aaPredicted RBP12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 ACTR6Q9GZN1 396 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 MYLK2Q9H1R3 596 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 MTHFD2LQ9H903 347 aaPredicted RBP12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 A4GALTQ9NPC4 353 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 RLIMQ9NVW2 624 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 CALML5Q9NZT1 146 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 CHRNA9Q9UGM1 479 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 CORO2BQ9UQ03 480 aa12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 SPIN1Q9Y657 262 aaPredicted RBP12.13□□□□□ -0.47
VPS9D1-204ENST00000565023 DSPPQ9NZW4 1301 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 LOC100653049A0A140TA62 436 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 TMEM247A6NEH6 219 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 KRT34O76011 436 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 ATE1O95260 518 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 NPPAP01160 153 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 DBIP07108 87 aaKnown RBP12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 RPS4Y1P22090 263 aaKnown RBP12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 APOBEC1P41238 236 aaKnown RBP12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 CRISP3P54108 245 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 OR2B6P58173 313 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 CYLC2Q14093 348 aaPredicted RBP12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 GNA13Q14344 377 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 TRMT5Q32P41 509 aaKnown RBP12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 PRAMEF8Q5VWM4 474 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 PRAMEF7Q5VXH5 474 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 SPNS3Q6ZMD2 512 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 ZNF836Q6ZNA1 936 aa12.12□□□□□ -0.47
VPS9D1-204ENST00000565023 TMPPEQ6ZT21 453 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms