RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 RNASET2O00584 256 aaKnown RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 TXNL1O43396 289 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 ICOSLGO75144 302 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 CD96P40200 585 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 PGDP52209 483 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 IRF8Q02556 426 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 PIN1Q13526 163 aaPredicted RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 HABP2Q14520 560 aaPredicted RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 C9orf64Q5T6V5 341 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 ZCCHC12Q6PEW1 402 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 PODNL1Q6PEZ8 512 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF322Q6U7Q0 402 aaPredicted RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 MOB3CQ70IA8 216 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 STX12Q86Y82 276 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 PHOSPHO2Q8TCD6 241 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 THEM6Q8WUY1 208 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 SMIM4Q8WVI0 70 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 FBXO17Q96EF6 278 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 WFDC6Q9BQY6 131 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 KNL1Q8NG31 2342 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 LRIT2A6NDA9 550 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 ARAFP10398 606 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 SOAT1P35610 550 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 GPX4P36969 197 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 RPL3P39023 403 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 C21orf58P58505 322 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 ACSM1Q08AH1 577 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF234Q14588 700 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 GAB4Q2WGN9 574 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 OR7E24Q6IFN5 339 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 APOOLQ6UXV4 268 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 LRRC70Q7Z2Q7 622 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 ETFBKMTQ8IXQ9 262 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 ARMC10Q8N2F6 343 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 GPR32P1Q8NGA4 272 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 SETD7Q8WTS6 366 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 ASB16Q96NS5 453 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 PIGMQ9H3S5 423 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 SEBOXQ9HB31 216 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 TAS2R5Q9NYW4 299 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 ENTPD4Q9Y227 616 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 PCYT1BQ9Y5K3 369 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 TRPM6Q9BX84 2022 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 CXorf51AA0A1B0GTR3 108 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF729A6NN14 1252 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 C5orf67F2Z3F1 127 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 SLCO2B1O94956 709 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 GALP22466 123 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 NOS3P29474 1203 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 GMFBP60983 142 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 C2orf68Q2NKX9 166 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 TANGO2Q6ICL3 276 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 FAAP20Q6NZ36 180 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 AGTRAPQ6RW13 159 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 TPRA1Q86W33 373 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 THOC6Q86W42 341 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 POGLUT1Q8NBL1 392 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 NR4A3Q92570 626 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 PFDN5Q99471 154 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF649Q9BS31 505 aa12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 RSPO3Q9BXY4 272 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-203ENST00000562609 C5orf52A6NGY3 159 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 ANHXE9PGG2 379 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 ASMTP46597 345 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 NPBWR1P48145 328 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 ARFIP1P53367 373 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 DLX5P56178 289 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 RAE1P78406 368 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 BLOC1S1P78537 153 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 OR2B11Q5JQS5 317 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 CLEC12AQ5QGZ9 265 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 H3F3CQ6NXT2 135 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 LINGO2Q7L985 606 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 SLC9B2Q86UD5 537 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 NAA40Q86UY6 237 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 IQCHQ86VS3 1027 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 SLC44A3Q8N4M1 653 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 OR4K5Q8NGD3 323 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 OR4D11Q8NGI4 311 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 CAMK2AQ9UQM7 478 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 PCDHGA5Q9Y5G8 931 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 PLXNA2O75051 1894 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 UBE2CO00762 179 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 PRKRAO75569 313 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 ETHE1O95571 254 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 LY86O95711 162 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 CH25HO95992 272 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 UCHL1P09936 223 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 MPC1LP0DKB6 136 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 C6P13671 934 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 GPR1P46091 355 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 PSMD4P55036 377 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 UBE2MP61081 183 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 FZD5Q13467 585 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 DOC2AQ14183 400 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 CEACAM19Q7Z692 300 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 MNTQ99583 582 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 STOX2Q9P2F5 926 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 YBX2Q9Y2T7 364 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 SPEGQ15772 3267 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms