RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 GNGT1P63211 74 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 CAPRIN1Q14444 709 aaKnown RBP11.19□□□□□ -0.62
SLIRP-211ENST00000557623 ZNF239Q16600 458 aaKnown RBP11.19□□□□□ -0.62
SLIRP-211ENST00000557623 SYT14P1Q58G82 188 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 NET1Q7Z628 596 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-211ENST00000557623 SERPINA11Q86U17 422 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 KIF18BQ86Y91 864 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 MCEMP1Q8IX19 187 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 C10orf111Q8N326 155 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 OR8J3Q8NGG0 315 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 RP9Q8TA86 221 aaKnown RBP11.19□□□□□ -0.62
SLIRP-211ENST00000557623 LRRC58Q96CX6 371 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 GMPPAQ96IJ6 420 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-211ENST00000557623 KAT8Q9H7Z6 458 aaKnown RBP11.19□□□□□ -0.62
SLIRP-211ENST00000557623 EVA1AQ9H8M9 152 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 CTPS2Q9NRF8 586 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 RLIMQ9NVW2 624 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 EMC9Q9Y3B6 208 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 MPDZO75970 2070 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 MSTNO14793 375 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 ZNF208O43345 1280 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 ADAM11O75078 769 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 AQP8O94778 261 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 GKN3PP0CG01 181 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 TFPIP10646 304 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 SNRPBP14678 240 aaKnown RBP11.18□□□□□ -0.62
SLIRP-211ENST00000557623 ACAA2P42765 397 aaKnown RBP11.18□□□□□ -0.62
SLIRP-211ENST00000557623 KIR2DL2P43627 348 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-211ENST00000557623 CPA2P48052 419 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 CTBP2P56545 445 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 CSNK2A1P68400 391 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-211ENST00000557623 SELPLGQ14242 412 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 RNPS1Q15287 305 aaKnown RBP11.18□□□□□ -0.62
SLIRP-211ENST00000557623 ADRM1Q16186 407 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 INTS11Q5TA45 600 aaKnown RBP11.18□□□□□ -0.62
SLIRP-211ENST00000557623 WBP2NLQ6ICG8 309 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 NANOGP8Q6NSW7 305 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 DHRS4L2Q6PKH6 230 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 TMPPEQ6ZT21 453 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 FAM214BQ7L5A3 538 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 GDF7Q7Z4P5 450 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 ADGRG3Q86Y34 549 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 SLC43A2Q8N370 569 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 CLIP4Q8N3C7 705 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 OR10A6Q8NH74 314 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 DDIT4LQ96D03 193 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 STARD4Q96DR4 205 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 OR5B2Q96R09 309 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 ECSITQ9BQ95 431 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 TACO1Q9BSH4 297 aaKnown RBP11.18□□□□□ -0.62
SLIRP-211ENST00000557623 RBM24Q9BX46 236 aaKnown RBP11.18□□□□□ -0.62
SLIRP-211ENST00000557623 FAM107BQ9H098 131 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 COQ10BQ9H8M1 238 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 NANOGQ9H9S0 305 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 GP6Q9HCN6 339 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 ARMCX1Q9P291 453 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 KCNN3Q9UGI6 736 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 OSGIN1Q9UJX0 560 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 SLC13A4Q9UKG4 626 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 HDGFL3Q9Y3E1 203 aa11.18□□□□□ -0.62
SLIRP-211ENST00000557623 UTP20O75691 2785 aaKnown RBP11.18□□□□□ -0.62
SLIRP-211ENST00000557623 FLNBO75369 2602 aaKnown RBP11.17□□□□□ -0.62
SLIRP-211ENST00000557623 TMED7-TICAM2A0A0A6YYA0 188 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 A8MXE2 369 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 SULT2B1O00204 365 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 SNX3O60493 162 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 SS18L1O75177 396 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-211ENST00000557623 SMNDC1O75940 238 aaKnown RBP eCLIP11.17□□□□□ -0.62
SLIRP-211ENST00000557623 PRKD3O94806 890 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 PMS2P2O95744 297 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 CD8BP10966 210 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 DRD4P21917 467 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 ENPP1P22413 925 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 CXCR1P25024 350 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 TACR3P29371 465 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 SSTR2P30874 369 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 PCGF2P35227 344 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 DIO1P49895 249 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 SIRPAP78324 504 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 SORDQ00796 357 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 GUSBP1Q15486 140 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 VWA1Q6PCB0 445 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 FCRLAQ7L513 359 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 LUZP2Q86TE4 346 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 MTDHQ86UE4 582 aaKnown RBP11.17□□□□□ -0.62
SLIRP-211ENST00000557623 PTOV1Q86YD1 416 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 ARMC8Q8IUR7 673 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 CADM2Q8N3J6 435 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 OR6K3Q8NGY3 331 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 RNF128Q8TEB7 428 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 ROBO4Q8WZ75 1007 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 ZHX1-C8orf76Q96EF9 292 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 C14orf79Q96F83 325 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 POM121Q96HA1 1249 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 SRXN1Q9BYN0 137 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 TRIM8Q9BZR9 551 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 ADAM19Q9H013 955 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 KLHL28Q9NXS3 571 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 PROCRQ9UNN8 238 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms