RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ARMCX1Q9P291 453 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 RPS6KB2Q9UBS0 482 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 KCNN3Q9UGI6 736 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 PRDM4Q9UKN5 801 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 CLEC4AQ9UMR7 237 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 POLQO75417 2590 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 TMED7-TICAM2A0A0A6YYA0 188 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 LOC100653049A0A140TA62 436 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 TUBAL3A6NHL2 446 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 EFNA2O43921 213 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 KRT34O76011 436 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 NPPAP01160 153 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 ENPP1P22413 925 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 TACR3P29371 465 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 PRKAR1BP31321 381 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 CLK1P49759 484 aaKnown RBP10.83□□□□□ -0.68
SRP54-206ENST00000555317 RAC3P60763 192 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 GNGT1P63211 74 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 SORDQ00796 357 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 TLE4Q04727 773 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 RBBP4Q09028 425 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 TMEM201Q5SNT2 666 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 INTS11Q5TA45 600 aaKnown RBP10.83□□□□□ -0.68
SRP54-206ENST00000555317 SLC43A2Q8N370 569 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 CLIP4Q8N3C7 705 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 OR6K3Q8NGY3 331 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 RNF128Q8TEB7 428 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 SLC35B4Q969S0 331 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 LRRC58Q96CX6 371 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 STARD4Q96DR4 205 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 ECSITQ9BQ95 431 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 TACO1Q9BSH4 297 aaKnown RBP10.83□□□□□ -0.68
SRP54-206ENST00000555317 SRXN1Q9BYN0 137 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 COQ10BQ9H8M1 238 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 GALNT8Q9NY28 637 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 SELENONQ9NZV5 590 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 JKAMPQ9P055 326 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 KLHL9Q9P2J3 617 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 TMED7Q9Y3B3 224 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 HDGFL3Q9Y3E1 203 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 SPG11Q96JI7 2443 aa10.83□□□□□ -0.68
SRP54-206ENST00000555317 FBP2O00757 339 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 SS18L1O75177 396 aaPredicted RBP10.82□□□□□ -0.68
SRP54-206ENST00000555317 PRKD3O94806 890 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 FESP07332 822 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 CD8BP10966 210 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 LSP1P33241 339 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 KIR2DL2P43627 348 aaPredicted RBP10.82□□□□□ -0.68
SRP54-206ENST00000555317 DIO1P49895 249 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 MAP2K6P52564 334 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 SEC24CP53992 1094 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 DLX5P56178 289 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 PLAURQ03405 335 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 SNTB1Q13884 538 aaKnown RBP10.82□□□□□ -0.68
SRP54-206ENST00000555317 SELPLGQ14242 412 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 EXOC3L2Q2M3D2 409 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 TMPPEQ6ZT21 453 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 BTLAQ7Z6A9 289 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 SERPINA11Q86U17 422 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 TMEM200AQ86VY9 491 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 ZZZ3Q8IYH5 903 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 C10orf111Q8N326 155 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 ACBD4Q8NC06 268 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 OR8J3Q8NGG0 315 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 OR10A6Q8NH74 314 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 SLC26A7Q8TE54 656 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 ABHD3Q8WU67 409 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 ZNF524Q96C55 264 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 C14orf79Q96F83 325 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 OPN3Q9H1Y3 402 aaPredicted RBP10.82□□□□□ -0.68
SRP54-206ENST00000555317 KAT8Q9H7Z6 458 aaKnown RBP10.82□□□□□ -0.68
SRP54-206ENST00000555317 OSGIN1Q9UJX0 560 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 ABCA4P78363 2273 aa10.82□□□□□ -0.68
SRP54-206ENST00000555317 CCDC168Q8NDH2 2452 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 MYO9AB2RTY4 2548 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 IGHV3-15A0A0B4J1V0 119 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 TMEM72A0PK05 275 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 GMNCA6NCL1 334 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 A8MXE2 369 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 ZNF208O43345 1280 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 FRS3O43559 492 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 ADAM11O75078 769 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 PMS2P2O95744 297 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 PRF1P14222 555 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 POU2F1P14859 743 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 AGTR1P30556 359 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 RGS8P57771 180 aaPredicted RBP10.81□□□□□ -0.68
SRP54-206ENST00000555317 OR2B6P58173 313 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 RASGEF1BQ0VAM2 473 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 ADRM1Q16186 407 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 FBXW10Q5XX13 1052 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 NANOGP8Q6NSW7 305 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 DHRS4L2Q6PKH6 230 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 PATL1Q86TB9 770 aaKnown RBP10.81□□□□□ -0.68
SRP54-206ENST00000555317 MTDHQ86UE4 582 aaKnown RBP10.81□□□□□ -0.68
SRP54-206ENST00000555317 RANBP3LQ86VV4 465 aaPredicted RBP10.81□□□□□ -0.68
SRP54-206ENST00000555317 ADGRG3Q86Y34 549 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 POU5F2Q8N7G0 328 aa10.81□□□□□ -0.68
SRP54-206ENST00000555317 RP9Q8TA86 221 aaKnown RBP10.81□□□□□ -0.68
SRP54-206ENST00000555317 RNF217Q8TC41 542 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms