RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	HIST2H2AA3	Q6FI13	130 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OR7E24	Q6IFN5	339 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MED27	Q6P2C8	311 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	RAD9B	Q6WBX8	426 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MEPCE	Q7L2J0	689 aa	Known RBP	5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	LAS2	Q8IYD9	372 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	LYG1	Q8N1E2	194 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NKAP	Q8N5F7	415 aa	Known RBP	5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CELF2-AS1	Q8N7Q2	184 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	C11orf44	Q8N8P7	122 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF527	Q8NB42	609 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	HUS1B	Q8NHY5	278 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MUC7	Q8TAX7	377 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	FBXO30	Q8TB52	745 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	RAB8B	Q92930	207 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	APH1A	Q96BI3	265 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	RAB39B	Q96DA2	213 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SH3YL1	Q96HL8	342 aa	Predicted RBP	5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SIGLEC10	Q96LC7	697 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SLC30A2	Q9BRI3	323 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	DDX31	Q9H8H2	851 aa	Known RBP	5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TIGAR	Q9NQ88	270 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ANO10	Q9NW15	660 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OXSM	Q9NWU1	459 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NKX1-2	Q9UD57	310 aa	Predicted RBP	5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SEC14L4	Q9UDX3	406 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	LEF1	Q9UJU2	399 aa	Predicted RBP	5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CES1P1	Q9UKY3	287 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ABCG2	Q9UNQ0	655 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OARD1	Q9Y530	152 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	AUP1	Q9Y679	476 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	KIAA1109	Q2LD37	5005 aa		5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NUP214	P35658	2090 aa	Predicted RBP	5	□□□□□ -1.61
RACGAP1-223	ENST00000551260	STARD9	Q9P2P6	4700 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260		A0A087WZY1	265 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OR6C65	A6NJZ3	312 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF724	A8MTY0	619 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TRIM49D1	C9J1S8	452 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TRAPPC2L	H3BP13	241 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NR5A2	O00482	541 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PHGDH	O43175	533 aa	Known RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	LIAS	O43766	372 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CCNT2	O60583	730 aa	Known RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	UTS2	O95399	124 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	AHSG	P02765	367 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CSNK2A2	P19784	350 aa	Predicted RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PI3	P19957	117 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	STIP1	P31948	543 aa	Known RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MTNR1A	P48039	350 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PIK3CG	P48736	1102 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	VPS41	P49754	854 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	HNMT	P50135	292 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF41	P51814	821 aa	Predicted RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	RWDD2B	P57060	319 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	KRTAP10-11	P60412	298 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PSG6	Q00889	435 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SLC18A2	Q05940	514 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF155	Q12901	538 aa	Predicted RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF154	Q13106	437 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PDCD1	Q15116	288 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PDK4	Q16654	411 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ALKBH6	Q3KRA9	238 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NRN1L	Q496H8	165 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PAGE2B	Q5JRK9	111 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	C11orf63	Q6NUN7	778 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	BRD3OS	Q6XYD6	125 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ADAMTSL5	Q6ZMM2	481 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	IKBIP	Q70UQ0	350 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	LRP11	Q86VZ4	500 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	GSPT2	Q8IYD1	628 aa	Known RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PARP8	Q8N3A8	854 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NUP37	Q8NFH4	326 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZFP90	Q8TF47	636 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	C1orf54	Q8WWF1	131 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	DACT3	Q96B18	629 aa	Predicted RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF524	Q96C55	264 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	DNAJA3	Q96EY1	480 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CNRIP1	Q96F85	164 aa	Predicted RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SYT3	Q9BQG1	590 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	KATNB1	Q9BVA0	655 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CAPS2	Q9BXY5	557 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MRPL37	Q9BZE1	423 aa	Known RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TBL1XR1	Q9BZK7	514 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF442	Q9H7R0	627 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SLC7A10	Q9NS82	523 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PAK5	Q9P286	719 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MYEF2	Q9P2K5	600 aa	Known RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MALT1	Q9UDY8	824 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PURG	Q9UJV8	347 aa	Known RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	FZR1	Q9UM11	496 aa		4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NOSIP	Q9Y314	301 aa	Known RBP	4.99	□□□□□ -1.61
RACGAP1-223	ENST00000551260	GXYLT2	A0PJZ3	443 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZC3H12D	A2A288	527 aa	Known RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SMTNL1	A8MU46	457 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260		M0R233	179 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF195	O14628	629 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SYNGR3	O43761	229 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SKAP2	O75563	359 aa	Predicted RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	IGKV1D-16	P01601	117 aa		4.98	□□□□□ -1.61

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