RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 HTR2AP28223 471 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 AGFG1P52594 562 aaKnown RBP20.2■□□□□ 0.82
BRF1-216ENST00000550208 RGS8P57771 180 aaPredicted RBP20.2■□□□□ 0.82
BRF1-216ENST00000550208 MXRA7P84157 204 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 FOXF2Q12947 444 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 PPP4R4Q6NUP7 873 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 PGAM4Q8N0Y7 254 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 OR52E4Q8NGH9 312 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 OR4D11Q8NGI4 311 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 CA5BP1Q8WTZ4 195 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 C3orf49Q96BT1 292 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 INTS12Q96CB8 462 aaKnown RBP20.2■□□□□ 0.82
BRF1-216ENST00000550208 KCTD14Q9BQ13 255 aaPredicted RBP20.2■□□□□ 0.82
BRF1-216ENST00000550208 SRXN1Q9BYN0 137 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 OR11A1Q9GZK7 315 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 PAQR5Q9NXK6 330 aaPredicted RBP20.2■□□□□ 0.82
BRF1-216ENST00000550208 ZNF175Q9Y473 711 aa20.2■□□□□ 0.82
BRF1-216ENST00000550208 DOPEY1Q5JWR5 2465 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 TMEM229AB2RXF0 380 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 CXCR6O00574 342 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 GSTA4O15217 222 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 AQP8O94778 261 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 SYNGR4O95473 234 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 TMIGD3P0DMS9 266 aaPredicted RBP20.19■□□□□ 0.82
BRF1-216ENST00000550208 CXCR1P25024 350 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 CTSSP25774 331 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 SLC7A1P30825 629 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 MNAT1P51948 309 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 NRF1Q16656 503 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 LRRC23Q53EV4 343 aaPredicted RBP20.19■□□□□ 0.82
BRF1-216ENST00000550208 CYBRD1Q53TN4 286 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 SYT14P1Q58G82 188 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 RBM45Q8IUH3 476 aaKnown RBP20.19■□□□□ 0.82
BRF1-216ENST00000550208 RNF148Q8N7C7 305 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 ROBO4Q8WZ75 1007 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 DNAJA3Q96EY1 480 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 ARL5BQ96KC2 179 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 CDRT15Q96T59 188 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 ZNF559Q9BR84 538 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 PRRG4Q9BZD6 226 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 EVA1AQ9H8M9 152 aa20.19■□□□□ 0.82
BRF1-216ENST00000550208 SPIN1Q9Y657 262 aaPredicted RBP20.19■□□□□ 0.82
BRF1-216ENST00000550208 SPTBN1Q01082 2364 aaKnown RBP20.19■□□□□ 0.82
BRF1-216ENST00000550208 MED12LQ86YW9 2145 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 IFNA14P01570 189 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 BNIP2Q12982 314 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 OR1Q1Q15612 314 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 NPTX1Q15818 432 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 C16orf89Q6UX73 402 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 TMPPEQ6ZT21 453 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 TRPM8Q7Z2W7 1104 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 DEFB107AQ8IZN7 70 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 GCNT2Q8N0V5 402 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 LSMEM1Q8N8F7 131 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 OR6T1Q8NGN1 323 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 VANGL1Q8TAA9 524 aaPredicted RBP20.18■□□□□ 0.82
BRF1-216ENST00000550208 SLC25A43Q8WUT9 341 aaPredicted RBP20.18■□□□□ 0.82
BRF1-216ENST00000550208 RASSF5Q8WWW0 418 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 MCHR1Q99705 422 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 TRIM2Q9C040 744 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 TIGARQ9NQ88 270 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 RPS6KB2Q9UBS0 482 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 MCTS1Q9ULC4 181 aaKnown RBP20.18■□□□□ 0.82
BRF1-216ENST00000550208 ICE1Q9Y2F5 2266 aa20.18■□□□□ 0.82
BRF1-216ENST00000550208 A0A1B0GWA3 101 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 ZC3H12DA2A288 527 aaKnown RBP20.17■□□□□ 0.82
BRF1-216ENST00000550208 NKX2-6A6NCS4 301 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 FAM90A27PA6NNH2 459 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 ZNF208O43345 1280 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 NCK1P16333 377 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 CALB2P22676 271 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 FKBP2P26885 142 aaKnown RBP20.17■□□□□ 0.82
BRF1-216ENST00000550208 CPOXP36551 454 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 CLK1P49759 484 aaKnown RBP20.17■□□□□ 0.82
BRF1-216ENST00000550208 RAC3P60763 192 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 RINLQ6ZS11 566 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 ATG4DQ86TL0 474 aaPredicted RBP20.17■□□□□ 0.82
BRF1-216ENST00000550208 RNF122Q9H9V4 155 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 TMEM27Q9HBJ8 222 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 TESQ9UGI8 421 aaKnown RBP20.17■□□□□ 0.82
BRF1-216ENST00000550208 CD300AQ9UGN4 299 aa20.17■□□□□ 0.82
BRF1-216ENST00000550208 SULT2B1O00204 365 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 TNFRSF1BP20333 461 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 BMP5P22003 454 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 HTR1EP28566 365 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 DIO1P49895 249 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 MYBPHQ13203 477 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 MAMDC2Q7Z304 686 aaPredicted RBP20.16■□□□□ 0.82
BRF1-216ENST00000550208 RANBP3LQ86VV4 465 aaPredicted RBP20.16■□□□□ 0.82
BRF1-216ENST00000550208 FAM156AQ8NDB6 213 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 RBM15BQ8NDT2 890 aaKnown RBP20.16■□□□□ 0.82
BRF1-216ENST00000550208 PROX1Q92786 737 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 CPNE4Q96A23 557 aaPredicted RBP20.16■□□□□ 0.82
BRF1-216ENST00000550208 DDIT4LQ96D03 193 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 ZFP3Q96NJ6 502 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 NDE1Q9NXR1 346 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 ZNF629Q9UEG4 869 aaPredicted RBP20.16■□□□□ 0.82
BRF1-216ENST00000550208 PLEKHB1Q9UF11 243 aaPredicted RBP20.16■□□□□ 0.82
BRF1-216ENST00000550208 EGFL7Q9UHF1 273 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 BAG5Q9UL15 447 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms