RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 LINC01555Q8NAE3 123 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 SLC2A12Q8TD20 617 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 THEM6Q8WUY1 208 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 GIMAP5Q96F15 307 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 MED11Q9P086 117 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 FBXL3Q9UKT7 428 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 CES1P1Q9UKY3 287 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 ZNF780BQ9Y6R6 833 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 IGKV1-8A0A0C4DH67 115 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 ANXA2P2A6NMY6 339 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 SNRPGP15A8MWD9 76 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 MAGEB4O15481 346 aaPredicted RBP13.13□□□□□ -0.31
SRP54-202ENST00000546080 HIST1H2ABP04908 130 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 IL5P05113 134 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 CERS1P27544 350 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 BCL6P41182 706 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 OLFML2AQ68BL7 652 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 HEPHL1Q6MZM0 1159 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 FAAP20Q6NZ36 180 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 FAM199XQ6PEV8 388 aaPredicted RBP13.13□□□□□ -0.31
SRP54-202ENST00000546080 LRFN4Q6PJG9 635 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 HIST3H2AQ7L7L0 130 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 HSD17B13Q7Z5P4 300 aaPredicted RBP13.13□□□□□ -0.31
SRP54-202ENST00000546080 SERPINA12Q8IW75 414 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 RAB42Q8N4Z0 105 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 SLC16A11Q8NCK7 471 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 LSM14AQ8ND56 463 aaKnown RBP13.13□□□□□ -0.31
SRP54-202ENST00000546080 HIST1H2ACQ93077 130 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 MS4A6EQ96DS6 147 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 WDR89Q96FK6 387 aaPredicted RBP13.13□□□□□ -0.31
SRP54-202ENST00000546080 PELOQ9BRX2 385 aaKnown RBP13.13□□□□□ -0.31
SRP54-202ENST00000546080 ARL6Q9H0F7 186 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 PRDM7Q9NQW5 492 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 TAS2R10Q9NYW0 307 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 MAFFQ9ULX9 164 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 COPS3Q9UNS2 423 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 TRBV2A0A0J9YWF9 115 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 ANKRD20A5PA0PJZ0 165 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 ANKRD61A6NGH8 418 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 PCP4L1A6NKN8 68 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 ZNF879B4DU55 563 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 PPP1R3DO95685 299 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 GABRA1P14867 456 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 CALCRP30988 508 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 ERVK-21P61565 698 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 ACTA2P62736 377 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 ACTG2P63267 376 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 DPTQ07507 201 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 CAMK1Q14012 370 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 ABHD17CQ6PCB6 329 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 PDZD9Q8IXQ8 264 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 HDDC3Q8N4P3 179 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 MARC2Q969Z3 335 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 PELI1Q96FA3 418 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 GINS4Q9BRT9 223 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 SLC6A15Q9H2J7 730 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 HAO2Q9NYQ3 351 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 FBXL2Q9UKC9 423 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 SIGLEC7Q9Y286 467 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 PCDHGA5Q9Y5G8 931 aa13.12□□□□□ -0.31
SRP54-202ENST00000546080 TCF20Q9UGU0 1960 aaKnown RBP13.12□□□□□ -0.31
SRP54-202ENST00000546080 TRAV27A0A087WT01 109 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 FXYD6-FXYD2A0A087WZ82 144 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 HMSDA8MTL9 139 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 CHURC1-FNTBB4DL54 471 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 TGM5O43548 720 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 GKN3PP0CG01 181 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 EDNRAP25101 427 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 HTR2AP28223 471 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 HCCSP53701 268 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 EEF1A1P68104 462 aaKnown RBP13.11□□□□□ -0.31
SRP54-202ENST00000546080 CTAG1AP78358 180 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 PRDX1Q06830 199 aaKnown RBP13.11□□□□□ -0.31
SRP54-202ENST00000546080 OR1Q1Q15612 314 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 ZIC1Q15915 447 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 FAM111BQ6SJ93 734 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 FCRLAQ7L513 359 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 ZNF454Q8N9F8 522 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 OR1S1Q8NH92 325 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 BPIFA2Q96DR5 249 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 SLC25A38Q96DW6 304 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 ZNF416Q9BWM5 594 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 FXYD6Q9H0Q3 95 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 TM7SF3Q9NS93 570 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 NTMQ9P121 344 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 UBE2QL1A1L167 161 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 SULT1B1O43704 296 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 AGR2O95994 175 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 PRNPP04156 253 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 GLULP15104 373 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 NDUFS1P28331 727 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 ST8SIA6P61647 398 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 RPS11P62280 158 aaKnown RBP eCLIP13.11□□□□□ -0.31
SRP54-202ENST00000546080 SIRPAP78324 504 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 CAP1Q01518 475 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 GPR68Q15743 365 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms