RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 NDC1Q9BTX1 674 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 NDEL1Q9GZM8 345 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 MKRN2Q9H000 416 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC28A3Q9HAS3 691 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 GALNT9Q9HCQ5 603 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 RPRD1BQ9NQG5 326 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 C14orf105Q9NVL8 296 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 MCUBQ9NWR8 336 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 MRPL39Q9NYK5 338 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 MAT2BQ9NZL9 334 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 ST6GALNAC2Q9UJ37 374 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 SERTAD3Q9UJW9 196 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 ICAM5Q9UMF0 924 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 RASD1Q9Y272 281 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 MED31Q9Y3C7 131 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 NPFFR2Q9Y5X5 522 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 SPTBN5Q9NRC6 3674 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 A0A0A6YYJ9 748 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 A0A1B0GTQ1 180 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 POM121BA6NF01 834 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 URADA6NGE7 173 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC9B1P1A6NJY1 282 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 RIIAD1A6NNX1 92 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GRXCR1A8MXD5 290 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CHP2O43745 196 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 FGF17O60258 216 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 REM1O75628 298 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NKX2-2O95096 273 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 BPNT1O95861 308 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 AVPP01185 164 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 PEPDP12955 493 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 LAMP2P13473 410 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MYOGP15173 224 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 UGT2B7P16662 529 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CD33P20138 364 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 PTNP21246 168 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF10P21506 573 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NOS3P29474 1203 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ACSL1P33121 698 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 EVI2BP34910 448 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TALDO1P37837 337 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MMP15P51511 669 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 OR10A3P58181 314 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 OR12D2P58182 307 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ACTC1P68032 377 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ACTA1P68133 377 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CRMP1Q14194 572 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GGTLC2Q14390 218 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GAS6Q14393 721 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NFATC4Q14934 902 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ITPRIPL2Q3MIP1 535 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CEP78Q5JTW2 689 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MANEAQ5SRI9 462 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 FAM27D1Q5T7N8 215 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF57Q68EA5 555 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 FAAH2Q6GMR7 532 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 FIGLAQ6QHK4 219 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ARL9Q6T311 187 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 C6orf15Q6UXA7 325 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 IL20RBQ6UXL0 311 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 LINC00114Q6XXX2 140 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF767PQ75MW2 155 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 RNF44Q7L0R7 432 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ABHD13Q7L211 337 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 BMP8AQ7Z5Y6 402 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CEACAM19Q7Z692 300 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CMIPQ8IY22 773 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CDK20Q8IZL9 346 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SYS1Q8N2H4 156 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 C9orf62Q8N4C0 152 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MS4A15Q8N5U1 240 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 LSMEM1Q8N8F7 131 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SAMD12Q8N8I0 201 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 COX18Q8N8Q8 333 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 BMPERQ8N8U9 685 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CAMKVQ8NCB2 501 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TMEM52Q8NDY8 209 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 C17orf47Q8NEP4 570 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 OR14C36Q8NHC7 312 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ZCCHC10Q8TBK6 192 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TRMT10AQ8TBZ6 339 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 DEDD2Q8WXF8 326 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SMPDL3BQ92485 455 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 HSD17B8Q92506 261 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NACC2Q96BF6 587 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 PEX11GQ96HA9 241 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 C4orf36Q96KX1 117 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 HYLS1Q96M11 299 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TBX5Q99593 518 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 IFT27Q9BW83 186 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 HDHD2Q9H0R4 259 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GHITMQ9H3K2 345 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SRMSQ9H3Y6 488 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 FBRSQ9HAH7 460 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MCCC2Q9HCC0 563 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ADAP2Q9NPF8 381 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF275Q9NSD4 429 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 FLRT3Q9NZU0 649 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MOSPD1Q9UJG1 213 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MRPS2Q9Y399 296 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms