RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 NUDT7P0C024 238 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 UQCRBP14927 111 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 GPX2P18283 190 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 KCNJ5P48544 419 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 LARS2Q15031 903 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 TMEM201Q5SNT2 666 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 DLEU7Q6UYE1 221 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 STAC2Q6ZMT1 411 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 STK32CQ86UX6 486 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 VRK2Q86Y07 508 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 DPP10Q8N608 796 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 NRGNQ92686 78 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 SLC35B4Q969S0 331 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 ARL5BQ96KC2 179 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 SPATA9Q9BWV2 254 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 PLEKHF2Q9H8W4 249 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 FANCFQ9NPI8 374 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 RLIMQ9NVW2 624 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 DCTN4Q9UJW0 460 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 OSGIN1Q9UJX0 560 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 ZNF232Q9UNY5 417 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 TRAPPC4Q9Y296 219 aa15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 ZNF443Q9Y2A4 671 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-205ENST00000537164 ZNF724A8MTY0 619 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 SULT2B1O00204 365 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 CASKO14936 926 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 PGM3O95394 542 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 ARAFP10398 606 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 ETS2P15036 469 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 PPP3CBP16298 524 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 NCF2P19878 526 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 PSMB1P20618 241 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 CRYGSP22914 178 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 POLR2HP52434 150 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 H3F3AP84243 136 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 PDK3Q15120 406 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 RPS26P11Q5JNZ5 115 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 ABLIM2Q6H8Q1 611 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 TFAP2EQ6VUC0 442 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 SPNS3Q6ZMD2 512 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 C22orf34Q6ZV56 151 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 NUFIP2Q7Z417 695 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 MTDHQ86UE4 582 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 C10orf111Q8N326 155 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 BBS10Q8TAM1 723 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 MAL2Q969L2 176 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 THOC1Q96FV9 657 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 TMEM38AQ9H6F2 299 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 ARMC7Q9H6L4 198 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 ZNF226Q9NYT6 803 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 ST6GALNAC2Q9UJ37 374 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 CORO2BQ9UQ03 480 aa15.3■□□□□ 0.04
SFSWAP-205ENST00000537164 F8P00451 2351 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 IGKV3D-15A0A087WSY6 115 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 TMED7-TICAM2A0A0A6YYA0 188 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 IGHV3-15A0A0B4J1V0 119 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 A0A0G2JND7 137 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 DEFB108AA8MXU0 73 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 GCM2O75603 506 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 TACR3P29371 465 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 RASGEF1BQ0VAM2 473 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 ZNF550Q7Z398 422 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 GABRG1Q8N1C3 465 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 CLIP4Q8N3C7 705 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 MED18Q9BUE0 208 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 LIME1Q9H400 295 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 IKZF5Q9H5V7 419 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 KLHL28Q9NXS3 571 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 LEF1Q9UJU2 399 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 EDARQ9UNE0 448 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 GPR52Q9Y2T5 361 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 TMED7Q9Y3B3 224 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 VPS13CQ709C8 3753 aa15.29■□□□□ 0.04
SFSWAP-205ENST00000537164 UQCRHLA0A096LP55 91 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 A0A1W2PPR1 153 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 ZNF716A6NP11 495 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 SIAH2O43255 324 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 FESP07332 822 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 GKN3PP0CG01 181 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 KLK2P20151 261 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 SLC16A1P53985 500 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 IST1P53990 364 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 ADRM1Q16186 407 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 EXOC3L2Q2M3D2 409 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 RUNDC3AQ59EK9 446 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 ZNF311Q5JNZ3 666 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 WBP2NLQ6ICG8 309 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 REEP3Q6NUK4 255 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 DDIT4LQ96D03 193 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 HDHD5Q9BXW7 423 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 RSPO3Q9BXY4 272 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 KLHL4Q9C0H6 718 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 OR11A1Q9GZK7 315 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 CXXC4Q9H2H0 198 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 CCDC134Q9H6E4 229 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 C12orf49Q9H741 205 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 MRGBPQ9NV56 204 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 TMEM181Q9P2C4 612 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 NDUFAF1Q9Y375 327 aa15.28■□□□□ 0.04
SFSWAP-205ENST00000537164 TMEM72A0PK05 275 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms