RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ADSLP30566 484 aaPredicted RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 OR2B6P58173 313 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 TXNL4AP83876 142 aaKnown RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 GNA13Q14344 377 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 P2RY6Q15077 328 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 STK11Q15831 433 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 GSTA3Q16772 222 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 C6orf10Q5SRN2 563 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 MRPL2Q5T653 305 aaKnown RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 ABLIM2Q6H8Q1 611 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 Q6ZT83 130 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 Q71RC1 249 aaPredicted RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 YTHDF3Q7Z739 585 aaKnown RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 GALNT5Q7Z7M9 940 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 ATG4DQ86TL0 474 aaPredicted RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 MTDHQ86UE4 582 aaKnown RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 CMIPQ8IY22 773 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 LRRC75A-AS1Q8N1F1 130 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 HSD17B8Q92506 261 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 AKAP1Q92667 903 aaKnown RBP eCLIP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 VPS33AQ96AX1 596 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 AURKBQ96GD4 344 aaPredicted RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 Q96MF0 132 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 RMND5AQ9H871 391 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 MTHFD2LQ9H903 347 aaPredicted RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 SDR39U1Q9NRG7 319 aaPredicted RBP12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 ZIM2Q9NZV7 527 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 EMC3Q9P0I2 261 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 P2RX2Q9UBL9 471 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 USH1CQ9Y6N9 552 aa12.66□□□□□ -0.38
RTN3P1-201ENST00000536295 TMED7-TICAM2A0A0A6YYA0 188 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 TMEM72A0PK05 275 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 CFAP73A6NFT4 308 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 HS3ST1O14792 307 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 KLF11O14901 512 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 PMS2P2O95744 297 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 BCHEP06276 602 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 DBIP07108 87 aaKnown RBP12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 INHBBP09529 407 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 RPS4Y1P22090 263 aaKnown RBP12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 TACR3P29371 465 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 HTR3AP46098 478 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 POLR2HP52434 150 aaKnown RBP12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 POLR2JP52435 117 aaKnown RBP12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 MAPK11Q15759 364 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 VRK2Q86Y07 508 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 CCDC103Q8IW40 242 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 PEX5LQ8IYB4 626 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 UBE2J2Q8N2K1 259 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 MIER2Q8N344 545 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 TMEM171Q8WVE6 324 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 ITCHQ96J02 903 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 TMEM204Q9BSN7 226 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 POTEKPQ9BYX7 375 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 TPT1P8Q9HAU6 139 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 NGBQ9NPG2 151 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 RLIMQ9NVW2 624 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 OSGIN1Q9UJX0 560 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 NOSIPQ9Y314 301 aaKnown RBP12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 TMED7Q9Y3B3 224 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 HDGFL3Q9Y3E1 203 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 RNF115Q9Y4L5 304 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 FLNAP21333 2647 aaKnown RBP12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 NF1P21359 2839 aa12.65□□□□□ -0.38
RTN3P1-201ENST00000536295 RAI1Q7Z5J4 1906 aaPredicted RBP12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF716A6NP11 495 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 RAMP1O60894 148 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 CD3EP07766 207 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 GKN3PP0CG01 181 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 UQCRBP14927 111 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 IGHV1-2P23083 117 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 PTH2RP49190 550 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 MVDP53602 400 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 DSTNP60981 165 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 EPS8Q12929 822 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 RPS26P11Q5JNZ5 115 aaPredicted RBP12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 NCMAPQ5T1S8 102 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 AGBL2Q5U5Z8 902 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF836Q6ZNA1 936 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 BIVMQ86UB2 503 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 OR52P1PQ8NH57 321 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 PIGXQ8TBF5 258 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 DDIT4LQ96D03 193 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 POM121Q96HA1 1249 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 ESRP2Q9H6T0 727 aaKnown RBP12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 TMEM181Q9P2C4 612 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 FREM1Q5H8C1 2179 aa12.64□□□□□ -0.39
RTN3P1-201ENST00000536295 DSCAMO60469 2012 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 IGKV3D-15A0A087WSY6 115 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 ZC3H12DA2A288 527 aaKnown RBP12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 FAM234BA2RU67 622 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 H7C1Q1 480 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 SMAD7O15105 426 aaKnown RBP12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 TFPTP0C1Z6 253 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 FKBP2P26885 142 aaKnown RBP12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 SLC1A3P43003 542 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 CLK1P49759 484 aaKnown RBP12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 CRISP3P54108 245 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 BSPH1Q075Z2 132 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms