RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PHOSPHO1Q8TCT1 267 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 EDARADDQ8WWZ3 215 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 GINS4Q9BRT9 223 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 LMAN2LQ9H0V9 348 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 ANKRD19PQ9H560 264 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 EQTNQ9NQ60 294 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 CLEC1BQ9P126 229 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 NPTNQ9Y639 398 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 ENPP4Q9Y6X5 453 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 A0A1B0GW55 424 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 GLOD5A6NK44 160 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 HPP00738 406 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 DUX4L2P0CJ85 424 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 DUX4L3P0CJ86 424 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 DUX4L4P0CJ87 422 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 DUX4L5P0CJ88 424 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 DUX4L6P0CJ89 424 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 DUX4L7P0CJ90 424 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 FPR3P25089 353 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 S100PP25815 95 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 IGFALSP35858 605 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 TMEM201Q5SNT2 666 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 AVPI1Q5T686 147 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 C18orf63Q68DL7 685 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 TNFAIP8L2Q6P589 184 aaPredicted RBP12.95□□□□□ -0.34
LIG1-203ENST00000536218 CAMK1GQ96NX5 476 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 AHSPQ9NZD4 102 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 PIPOXQ9P0Z9 390 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 TAAR2Q9P1P5 351 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 DUX4Q9UBX2 424 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 A0A1W2PPV9 198 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 SULT1C2O00338 296 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 SLC28A2O43868 658 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 F12P00748 615 aaPredicted RBP12.95□□□□□ -0.34
LIG1-203ENST00000536218 RBMS1P29558 406 aaKnown RBP12.95□□□□□ -0.34
LIG1-203ENST00000536218 STARP49675 285 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 MANFP55145 182 aaKnown RBP12.95□□□□□ -0.34
LIG1-203ENST00000536218 RIPPLY1Q0D2K3 151 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 ILKQ13418 452 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 C21orf62-AS1Q17RA5 79 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 FAM27D1Q5T7N8 215 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 SPAG16Q8N0X2 631 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 IL17RCQ8NAC3 791 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 TRMT10AQ8TBZ6 339 aaKnown RBP12.95□□□□□ -0.34
LIG1-203ENST00000536218 BTBD1Q9H0C5 482 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 MYNNQ9NPC7 610 aa12.95□□□□□ -0.34
LIG1-203ENST00000536218 ZNF3P17036 446 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 C21orf58P58505 322 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 TRAM2Q15035 370 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 DCST1Q5T197 706 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 ZNF660Q6AZW8 331 aaPredicted RBP12.94□□□□□ -0.34
LIG1-203ENST00000536218 CAMKMTQ7Z624 323 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 TBC1D19Q8N5T2 526 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 EIF4E3Q8N5X7 224 aaKnown RBP12.94□□□□□ -0.34
LIG1-203ENST00000536218 ACOT12Q8WYK0 555 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 FGF22Q9HCT0 170 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 SDHAF3Q9NRP4 125 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 HEATR5BQ9P2D3 2071 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 PRAMEF2O60811 474 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 PRKRAO75569 313 aaKnown RBP12.94□□□□□ -0.34
LIG1-203ENST00000536218 ADAP00813 363 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 UGT2B7P16662 529 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 AK4P27144 223 aaPredicted RBP12.94□□□□□ -0.34
LIG1-203ENST00000536218 SHC1P29353 583 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 ADPRHP54922 357 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 TFF2Q03403 129 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 SMCO1Q147U7 214 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 KLBQ86Z14 1044 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 PFDN5Q99471 154 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 MENTQ9BUN1 341 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 APOOQ9BUR5 198 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 C1QTNF2Q9BXJ5 285 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 OR51M1Q9H341 326 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 THSD1Q9NS62 852 aa12.94□□□□□ -0.34
LIG1-203ENST00000536218 H2AFB1P0C5Y9 115 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 PPIBP23284 216 aaKnown RBP12.93□□□□□ -0.34
LIG1-203ENST00000536218 B3GNTL1Q67FW5 361 aaPredicted RBP12.93□□□□□ -0.34
LIG1-203ENST00000536218 C12orf73Q69YU5 71 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 ACSM5Q6NUN0 579 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 ENPP7Q6UWV6 458 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 OR4F15Q8NGB8 312 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 RAB8BQ92930 207 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 RBM14Q96PK6 669 aaKnown RBP12.93□□□□□ -0.34
LIG1-203ENST00000536218 C7orf50Q9BRJ6 194 aaKnown RBP12.93□□□□□ -0.34
LIG1-203ENST00000536218 MS4A8Q9BY19 250 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 CXorf36Q9H7Y0 433 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 ZSCAN32Q9NX65 697 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 MUC22E2RYF6 1773 aaPredicted RBP12.93□□□□□ -0.34
LIG1-203ENST00000536218 TMPRSS11DO60235 418 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 LIMS3P0CW19 117 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 LIMS4P0CW20 117 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 ALPPL2P10696 532 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 MST1P26927 711 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 RFX3P48380 749 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 CSNK1G2P78368 415 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 OCLNQ16625 522 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 MANEAQ5SRI9 462 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 USP53Q70EK8 1073 aa12.93□□□□□ -0.34
LIG1-203ENST00000536218 STX12Q86Y82 276 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms