RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SLC1A3P43003 542 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 KCNJ5P48544 419 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 POLR2HP52434 150 aaKnown RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 RPS3AP61247 264 aaKnown RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 SIRPAP78324 504 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 KRT72Q14CN4 511 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 ZNF239Q16600 458 aaKnown RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 NRF1Q16656 503 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 INTS11Q5TA45 600 aaKnown RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 WBP2NLQ6ICG8 309 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 VWA1Q6PCB0 445 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 CHMP1BQ7LBR1 199 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 PATL1Q86TB9 770 aaKnown RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 SLC30A8Q8IWU4 369 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 OR6T1Q8NGN1 323 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 CA5BP1Q8WTZ4 195 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 ABHD3Q8WU67 409 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 C3orf49Q96BT1 292 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 HOPXQ9BPY8 73 aaPredicted RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 KCTD14Q9BQ13 255 aaPredicted RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 CALHM2Q9HA72 323 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 SPAG4Q9NPE6 437 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 COQ3Q9NZJ6 369 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 ADA2Q9NZK5 511 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 TMEM181Q9P2C4 612 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 PLEKHB1Q9UF11 243 aaPredicted RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 EGFL7Q9UHF1 273 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 SLC13A4Q9UKG4 626 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 CRYBG3Q68DQ2 2970 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 PRSS44E7EML9 344 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 CXCR6O00574 342 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 CLDN14O95500 239 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 LGI1O95970 557 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 IL2RAP01589 272 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 FESP07332 822 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 HOXD4P09016 255 aaPredicted RBP12.55□□□□□ -0.4
VPS11-205ENST00000534551 T-ENOLP0DO92 83 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 UQCRBP14927 111 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 TCN1P20061 433 aaPredicted RBP12.55□□□□□ -0.4
VPS11-205ENST00000534551 MSX2P35548 267 aaPredicted RBP12.55□□□□□ -0.4
VPS11-205ENST00000534551 TIMP3P35625 211 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 CPOXP36551 454 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 EEFSECP57772 596 aaKnown RBP12.55□□□□□ -0.4
VPS11-205ENST00000534551 NCALDP61601 193 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 MXRA7P84157 204 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 MYBPHQ13203 477 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 CYBRD1Q53TN4 286 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 XKRXQ6PP77 449 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 RINLQ6ZS11 566 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 MAMDC2Q7Z304 686 aaPredicted RBP12.55□□□□□ -0.4
VPS11-205ENST00000534551 ATG4DQ86TL0 474 aaPredicted RBP12.55□□□□□ -0.4
VPS11-205ENST00000534551 P3H2Q8IVL5 708 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 PGAM4Q8N0Y7 254 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 OR52E4Q8NGH9 312 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 SLC26A7Q8TE54 656 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 OSTF1Q92882 214 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 WNT2BQ93097 391 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 ADAM19Q9H013 955 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 ARMC7Q9H6L4 198 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 RNF122Q9H9V4 155 aa12.55□□□□□ -0.4
VPS11-205ENST00000534551 NPDC1Q9NQX5 325 aaPredicted RBP12.55□□□□□ -0.4
VPS11-205ENST00000534551 TESQ9UGI8 421 aaKnown RBP12.55□□□□□ -0.4
VPS11-205ENST00000534551 A0A1W2PNV4 684 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 CPSF4LA6NMK7 179 aaKnown RBP12.54□□□□□ -0.4
VPS11-205ENST00000534551 ZNF814B7Z6K7 855 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 SYT5O00445 386 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 SMAD9O15198 467 aaKnown RBP12.54□□□□□ -0.4
VPS11-205ENST00000534551 RAMP1O60894 148 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 TNFSF13O75888 250 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 UBOX5O94941 541 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 IMPDH2P12268 514 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 ENPP1P22413 925 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 APOBEC1P41238 236 aaKnown RBP12.54□□□□□ -0.4
VPS11-205ENST00000534551 OR1E2P47887 323 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 DIO1P49895 249 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 COPZ1P61923 177 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 TFF3Q07654 80 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 SNTB1Q13884 538 aaKnown RBP12.54□□□□□ -0.4
VPS11-205ENST00000534551 VEZF1Q14119 521 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 VTCN1Q7Z7D3 282 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 CARM1Q86X55 608 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 DEFB107AQ8IZN7 70 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 CNEP1R1Q8N9A8 125 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
VPS11-205ENST00000534551 TPD52L3Q96J77 140 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 TM9SF2Q99805 663 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 SERINC1Q9NRX5 453 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 ZNF175Q9Y473 711 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 V9GYQ6 96 aa12.54□□□□□ -0.4
VPS11-205ENST00000534551 IGKV1D-42A0A075B6H8 117 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 NBPF19A0A087WUL8 3843 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 GJE1A6NN92 205 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 HSPB2A8KAH6 182 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 B2RBV5 119 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 EEF1E1-BLOC1S5C9J1V9 151 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 EEF1E1O43324 174 aaKnown RBP12.53□□□□□ -0.4
VPS11-205ENST00000534551 RCBTB2O95199 551 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 SYNGR4O95473 234 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 THY1P04216 161 aa12.53□□□□□ -0.4
VPS11-205ENST00000534551 AGAP20933 346 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms