RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 PCDHGB6Q9Y5F9 930 aa7.71□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 SPIN1Q9Y657 262 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 A8MVM7 634 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 EFCAB9A8MZ26 197 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ACOT7O00154 380 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PIP5K1CO60331 668 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 MITFO75030 526 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 WISP1O95388 367 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 OPN1LWP04000 364 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 FAM87AP0C7U9 286 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PEPDP12955 493 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ZNF26P17031 533 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ADH6P28332 368 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 MAGEA5P43359 124 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 GPR4P46093 362 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 DAPP51397 102 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ALDH3A2P51648 485 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 LSM11P83369 360 aaKnown RBP eCLIP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PMP22Q01453 160 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PRKCDQ05655 676 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 CRYZQ08257 329 aaKnown RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 SLC10A1Q14973 349 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.7□□□□□ -1.181e-17■■□□□ 12.3
NEDD8-MDP1-201ENST00000530579 ZIK1Q3SY52 487 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 SLC25A53Q5H9E4 307 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 WIPI1Q5MNZ9 446 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ZNF770Q6IQ21 691 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PGBD2Q6P3X8 592 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ZER1Q7Z7L7 766 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 GALNT5Q7Z7M9 940 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 GTPBP8Q8N3Z3 284 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 TMEM251Q8N6I4 163 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PACRGLQ8N7B6 248 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ZFP62Q8NB50 900 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 FAM83FQ8NEG4 500 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PFN4Q8NHR9 129 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 DDIT4LQ96D03 193 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 SGTBQ96EQ0 304 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 FAM46AQ96IP4 442 aaKnown RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 SFXN2Q96NB2 322 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 NPAS1Q99742 590 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PIGQQ9BRB3 760 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 TMEM43Q9BTV4 400 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 OSBPL10Q9BXB5 764 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 UCK2Q9BZX2 261 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 GABARAPL1Q9H0R8 117 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 DEFB127Q9H1M4 99 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 TMEM185BQ9H7F4 350 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 KRT84Q9NSB2 600 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 CHRNA9Q9UGM1 479 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ZMIZ1Q9ULJ6 1067 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 TMEM5Q9Y2B1 443 aa7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 MRPS18CQ9Y3D5 142 aaKnown RBP7.7□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 IGKV1D-42A0A075B6H8 117 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 TRAV36DV7A0A075B6V5 113 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 OR2M5A3KFT3 312 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ARRDC5A6NEK1 342 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 UNC119BA6NIH7 251 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ENO4A6NNW6 628 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 H3BML4 177 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ETV2O00321 342 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 TFECO14948 347 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 EFNA2O43921 213 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 GLSO94925 669 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 AHSA1O95433 338 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 CH25HO95992 272 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 HPRP00739 348 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 HIST1H2ABP04908 130 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ALPLP05186 524 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 HPNP05981 417 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 SAGP10523 405 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 ZNF17P17021 662 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 CDH2P19022 906 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 FUT1P19526 365 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 MAKP20794 623 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 IL11P20809 199 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 GSTM3P21266 225 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 CBLP22681 906 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 IGFBP5P24593 272 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 FKBP2P26885 142 aaKnown RBP7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 SFTPDP35247 375 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 OMPP47874 163 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 MAP2K6P52564 334 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 RAD23AP54725 363 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 CTBP2P56545 445 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PPP2R2BQ00005 443 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 LINC00303Q3SY05 128 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 TMEM176BQ3YBM2 270 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 PLEKHN1Q494U1 663 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 C1orf140Q5VVS0 124 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 C1orf94Q6P1W5 598 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 FAHD1Q6P587 224 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 IZUMO2Q6UXV1 221 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 Q6ZS92 163 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 HIST3H2AQ7L7L0 130 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 FAM109AQ8N4B1 249 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 RBMXL3Q8N7X1 1067 aaKnown RBP7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 STK35Q8TDR2 534 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 SMPDL3BQ92485 455 aa7.69□□□□□ -1.18
NEDD8-MDP1-201ENST00000530579 HIST1H2ACQ93077 130 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms