RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 RHBDD3Q9Y3P4 386 aa2.92□□□□□ -1.94
AMBRA1-208ENST00000529558 USP16Q9Y5T5 823 aa2.92□□□□□ -1.94
AMBRA1-208ENST00000529558 ARHGEF11O15085 1522 aa2.92□□□□□ -1.94
AMBRA1-208ENST00000529558 MAP3K1Q13233 1512 aa2.92□□□□□ -1.94
AMBRA1-208ENST00000529558 RRBP1Q9P2E9 1410 aaKnown RBP2.92□□□□□ -1.94
AMBRA1-208ENST00000529558 NCANO14594 1321 aa2.92□□□□□ -1.94
AMBRA1-208ENST00000529558 CNTNAP2Q9UHC6 1331 aa2.92□□□□□ -1.94
AMBRA1-208ENST00000529558 MTUS2Q5JR59 1369 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CCNB3Q8WWL7 1395 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 TRGV8A0A0C4DH27 118 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 A0A0J9YYE9 177 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 LOC100653049A0A140TA62 436 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 SAGE2PA6NJ88 616 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 PP2D1A8MPX8 630 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 MPTX1A8MV57 137 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 HIP1O00291 1037 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 TFECO14948 347 aaPredicted RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 OR10H3O60404 316 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 KRT34O76011 436 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 KRT36O76013 467 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 LYPD3O95274 346 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 SNAI1O95863 264 aaPredicted RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 TRBC1P01850 177 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 MMP1P03956 469 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 SERPINA2P20848 420 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 PRDX3P30048 256 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CHRNB4P30926 498 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CCKARP32238 428 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 ETV5P41161 510 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 UQCRFS1P47985 274 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CSRP3P50461 194 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 BCAP31P51572 246 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 INHBEP58166 350 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 NANOS2P60321 138 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 RPS14P62263 151 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 KCNJ2P63252 427 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 SRPXP78539 464 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 VLDLRP98155 873 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 IL18R1Q13478 541 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CUL1Q13616 776 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 FHL1Q13642 323 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 ITIH4Q14624 930 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 ZNF146Q15072 292 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CCL14Q16627 93 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 TRIM16LQ309B1 348 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 TEX44Q53QW1 395 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 ZNF57Q68EA5 555 aaPredicted RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 ZNF324BQ6AW86 544 aaPredicted RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 PWWP2BQ6NUJ5 590 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 DBX2Q6ZNG2 339 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 VTCN1Q7Z7D3 282 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 KRTAP19-1Q8IUB9 90 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CCDC65Q8IXS2 484 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 ATP6V0D2Q8N8Y2 350 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 OR52H1Q8NGJ2 320 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 LILRB4Q8NHJ6 448 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 RFESDQ8TAC1 157 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 C11orf45Q8TAV5 145 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 ZNF519Q8TB69 540 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 SETD7Q8WTS6 366 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 TRUB1Q8WWH5 349 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CRYGNQ8WXF5 182 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 TOP1MTQ969P6 601 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CELF6Q96J87 481 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 LYZL4Q96KX0 146 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 ZNF641Q96N77 438 aaPredicted RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 GAL3ST1Q99999 423 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 NAT10Q9H0A0 1025 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 RACGAP1Q9H0H5 632 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 PARLQ9H300 379 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 FBXO44Q9H4M3 255 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 SP140LQ9H930 580 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 EXOSC3Q9NQT5 275 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 ABCC13Q9NSE7 274 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 NUDT15Q9NV35 164 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 LYARQ9NX58 379 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 MTCH1Q9NZJ7 389 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 THAP10Q9P2Z0 257 aaPredicted RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 PHF11Q9UIL8 331 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 NUP50Q9UKX7 468 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 MGAT4AQ9UM21 535 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 SPATA2Q9UM82 520 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 GAB2Q9UQC2 676 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 PYGO1Q9Y3Y4 419 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 KDM5BQ9UGL1 1544 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 GPATCH8Q9UKJ3 1502 aaKnown RBP2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 NEURL4Q96JN8 1562 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 CACNA1IQ9P0X4 2223 aa2.91□□□□□ -1.94
AMBRA1-208ENST00000529558 DOCK7Q96N67 2140 aa2.9□□□□□ -1.94
AMBRA1-208ENST00000529558 USP47Q96K76 1375 aa2.9□□□□□ -1.94
AMBRA1-208ENST00000529558 ABCC2Q92887 1545 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 LOC100506127A0A0U1RQW1 187 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 TEX48A0A1B0GUV7 120 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 TCRBV9S1A1TA0A576 114 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 MEIOCA2RUB1 952 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 A8MXQ7 604 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 IDSB3KWA1 339 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 BMPR1BO00238 502 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 WWP2O00308 870 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 554.3 ms