RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TIGD3Q6B0B8 471 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 DMKNQ6E0U4 476 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 RTL6Q6ICC9 239 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 OR2A2Q6IF42 318 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SPOPLQ6IQ16 392 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 FAM166AQ6J272 317 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 FAM92BQ6ZTR7 304 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 HSD11B1LQ7Z5J1 315 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SLFN11Q7Z7L1 901 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 GALNT5Q7Z7M9 940 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SLC26A11Q86WA9 606 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 AMIGO1Q86WK6 493 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CATSPERDQ86XM0 798 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CEP57L1Q8IYX8 460 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 KIRREL3Q8IZU9 778 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 RYBPQ8N488 228 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 RELL2Q8NC24 303 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 OR13J1Q8NGT2 312 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 OR5K2Q8NHB8 316 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 FLVCR1-AS1Q8TAF5 88 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 C11orf45Q8TAV5 145 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ZNF519Q8TB69 540 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 MCOLN3Q8TDD5 553 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 RNF128Q8TEB7 428 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ZNF418Q8TF45 676 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 ASZ1Q8WWH4 475 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 METTL21AQ8WXB1 218 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 RASL10AQ92737 203 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CCDC47Q96A33 483 aaKnown RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 C10orf90Q96M02 699 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 USP28Q96RU2 1077 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CPXM1Q96SM3 734 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 LPAR4Q99677 370 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 FAM173AQ9BQD7 235 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SLC39A3Q9BRY0 314 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 MLPHQ9BV36 600 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 OR52A5Q9H2C5 316 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SRMSQ9H3Y6 488 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ZWILCHQ9H900 591 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 UGT1A10Q9HAW8 530 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 NTN4Q9HB63 628 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ZNF160Q9HCG1 818 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 POLD4Q9HCU8 107 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SH2D2AQ9NP31 389 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ABCB10Q9NRK6 738 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 GLRX2Q9NS18 164 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CUTCQ9NTM9 273 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 RMND1Q9NWS8 449 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 PAQR5Q9NXK6 330 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 NUDT4Q9NZJ9 180 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SPATA7Q9P0W8 599 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ATXN10Q9UBB4 475 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ARMCX3Q9UH62 379 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 ZDHHC2Q9UIJ5 367 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 OSGIN1Q9UJX0 560 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 C3orf18Q9UK00 162 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 NOCTQ9UK39 431 aaKnown RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 NPIPA1Q9UND3 350 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 WDR37Q9Y2I8 494 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CRYL1Q9Y2S2 319 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 YARS2Q9Y2Z4 477 aaKnown RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 MRPS18CQ9Y3D5 142 aaKnown RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 SLC22A7Q9Y694 548 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CADP27708 2225 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 STARD9Q9P2P6 4700 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 DMBT1Q9UGM3 2413 aaPredicted RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 DNAH9Q9NYC9 4486 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PLECQ15149 4684 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 IGKV3D-11A0A0A0MRZ8 115 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 TRBV5-4A0A0C4DH59 114 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 A0A1B0GTH9 108 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 A0A1W2PPH5 198 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 A0A1W2PR80 420 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 BICDL2A1A5D9 508 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 OR2A25A4D2G3 310 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 OR6C74A6NCV1 312 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 SAGE2PA6NJ88 616 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 LIPT2A6NK58 231 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 A6NLC8 198 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 OR52A4PA6NMU1 304 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 J3QLI3 93 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PHOX2AO14813 284 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 EMC8O43402 210 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PEX14O75381 377 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PDE5AO76074 875 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 SNX4O95219 450 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 SLC25A14O95258 325 aaPredicted RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 CCNDBP1O95273 360 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ACTL6AO96019 429 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CALB1P05937 261 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 HPNP05981 417 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 TACSTD2P09758 323 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PPIAL4GP0DN37 164 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 EZRP15311 586 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 PSMB1P20618 241 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 IGFBP5P24593 272 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CCNCP24863 283 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PTPN3P26045 913 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 GIFP27352 417 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PTPN6P29350 595 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms