RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CUL9Q8IWT3 2517 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 GON4LQ3T8J9 2241 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SPAG17Q6Q759 2223 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SDK1Q7Z5N4 2213 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 MED19A0JLT2 244 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 FEZF1A0PJY2 475 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 HYKKA2RU49 373 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 LRIT2A6NDA9 550 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 ANKDD1BA6NHY2 528 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM114B3SHH9 223 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM150CB9EJG8 249 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 E7EQ34 232 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 H0YIV9 168 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 H3BMH7 237 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 FOXE1O00358 373 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 MANBAO00462 879 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 UBFD1O14562 309 aaKnown RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 HAT1O14929 419 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF749O43361 778 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 HCRTR1O43613 425 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 PGM3O95394 542 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 KRT6AP02538 564 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 KRT6BP04259 564 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SERPINA6P08185 405 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 FGF4P08620 206 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 HBQ1P09105 142 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 NR2F1P10589 423 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 NEFHP12036 1026 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TSPAN8P19075 237 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 ITIH1P19827 911 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 CD22P20273 847 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 BGNP21810 368 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 CD82P27701 267 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SERPINB1P30740 379 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 HPDP32754 393 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SERPINB5P36952 375 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SLC15A1P46059 708 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 KRT6CP48668 564 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 CCNG1P51959 295 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 PKNOX1P55347 436 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 RGS1Q08116 209 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 LCP2Q13094 533 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 STX3Q13277 289 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 FAM53BQ14153 422 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 CHI3L2Q15782 390 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 RBBP7Q16576 425 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 NTRK2Q16620 822 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 NDUFA9Q16795 377 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 MEP1AQ16819 746 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 DEFB110Q30KQ9 67 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 GGTA1PQ4G0N0 100 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 C14orf177Q52M58 125 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 HSP90B2PQ58FF3 399 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 CFAP157Q5JU67 520 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 GARNL3Q5VVW2 1013 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 GPR139Q6DWJ6 353 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 FRMPD2BQ6IN97 320 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 LCN10Q6JVE6 187 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 PWWP2BQ6NUJ5 590 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 CFAP77Q6ZQR2 320 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 GPRIN3Q6ZVF9 776 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 VN1R4Q7Z5H5 301 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SYVN1Q86TM6 617 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TRPT1Q86TN4 253 aaKnown RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 ASPGQ86U10 573 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM126BQ8IUX1 230 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 PLD3Q8IV08 490 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 PM20D2Q8IYS1 436 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SLC5A8Q8N695 610 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 GCSAMQ8N6F7 178 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 CSNK1A1LQ8N752 337 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TTC29Q8NA56 475 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 CAMKVQ8NCB2 501 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TRPV3Q8NET8 790 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TTLQ8NG68 377 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 OR7G3Q8NG95 312 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 OR4F6Q8NGB9 312 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 OR52B6Q8NGF0 335 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 OR1L3Q8NH93 324 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 NT5CQ8TCD5 201 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF473Q8WTR7 871 aaKnown RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SLC13A3Q8WWT9 602 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 NXPE2Q96DL1 559 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 MOCOSQ96EN8 888 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 LRR1Q96L50 414 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF578Q96N58 590 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM237Q96Q45 408 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 CTRCQ99895 268 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 PAIP2Q9BPZ3 127 aaKnown RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SELENOSQ9BQE4 189 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 NLNQ9BYT8 704 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 GFRA4Q9GZZ7 299 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 SPNS1Q9H2V7 528 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 HRH4Q9H3N8 390 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 RAD21L1Q9H4I0 556 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 FANCEQ9HB96 536 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 EML4Q9HC35 981 aaKnown RBP2.88□□□□□ -1.95
VPS13B-209ENST00000521559 APMAPQ9HDC9 416 aa2.88□□□□□ -1.95
VPS13B-209ENST00000521559 MED4Q9NPJ6 270 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms