RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 IFNAR2P48551 515 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 CASP4P49662 377 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 HNRNPA3P51991 378 aaKnown RBP3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 PLK1P53350 603 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 MAP2K1Q02750 393 aaPredicted RBP3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 CKAP4Q07065 602 aaKnown RBP3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 ZNF630Q2M218 657 aaPredicted RBP3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 CCDC152Q4G0S7 254 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 KLF17Q5JT82 389 aaPredicted RBP3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 VRK2Q86Y07 508 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 TRMT10AQ8TBZ6 339 aaKnown RBP3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 MRPS31Q92665 395 aaKnown RBP3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 EBF4Q9BQW3 602 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 UFSP2Q9NUQ7 469 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 NUDT15Q9NV35 164 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 NAP1L2Q9ULW6 460 aaPredicted RBP3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 RPH3ALQ9UNE2 315 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 POLDIP2Q9Y2S7 368 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 TIMM10BQ9Y5J6 103 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 KIF16BQ96L93 1317 aa3.46□□□□□ -1.85
HMGCS1-207ENST00000514610 CLSPNQ9HAW4 1339 aa3.46□□□□□ -1.85
HMGCS1-207ENST00000514610 PSMB11A5LHX3 300 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 TMEM110-MUSTN1A8MSY1 372 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 TRDCB7Z8K6 153 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 H0YCG3 227 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 LGI1O95970 557 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 HPNP05981 417 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 PRG2P13727 222 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 AZU1P20160 251 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 IMPDH1P20839 514 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 YWHABP31946 246 aaKnown RBP3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 UGT1A5P35504 534 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 APOC4P55056 127 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 TLE4Q04727 773 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 ORC2Q13416 577 aaPredicted RBP3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 GRB7Q14451 532 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 NSUN5P1Q3KNT7 163 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 CCDC80Q76M96 950 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 TMEM110Q86TL2 294 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 SLC34A3Q8N130 599 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 FAM133AQ8N9E0 248 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 ZNF740Q8NDX6 193 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 RLN3Q8WXF3 142 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 TRIM44Q96DX7 344 aaPredicted RBP3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 LRRN3Q9H3W5 708 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 VCPKMTQ9H867 229 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 SH2D2AQ9NP31 389 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 SMOXQ9NWM0 555 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 ADAM22Q9P0K1 906 aa3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 PRRC2AP48634 2157 aaKnown RBP3.46□□□□□ -1.86
HMGCS1-207ENST00000514610 MEGF6O75095 1541 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 USP27XA6NNY8 438 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 H0Y9J4 135 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 MAGEB3O15480 346 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 N4BP1O75113 896 aaKnown RBP3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 ZNF780AO75290 641 aaPredicted RBP3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 LGALS2P05162 132 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 NPR2P20594 1047 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 GABRR1P24046 479 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 HTR1FP30939 366 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 DRD3P35462 400 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 TDO2P48775 406 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 HLCSP50747 726 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 ARFIP1P53367 373 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 CSNK1G2P78368 415 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 DAZ2Q13117 558 aaKnown RBP3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 GANABQ14697 944 aaKnown RBP3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 BEND3Q5T5X7 828 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 ATAD3BQ5T9A4 648 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 TMEM225Q6GV28 225 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 SYT10Q6XYQ8 523 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 VSTM4Q8IW00 320 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 OR52M1Q8NGK5 317 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 ST8SIA1Q92185 356 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 RPUSD4Q96CM3 377 aaKnown RBP3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 TUBGCP2Q9BSJ2 902 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 DAZ3Q9NR90 486 aaKnown RBP3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 RPS6KB2Q9UBS0 482 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 KIF25Q9UIL4 384 aa3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 MRPS7Q9Y2R9 242 aaKnown RBP3.45□□□□□ -1.86
HMGCS1-207ENST00000514610 WI2-2373I1.2A0A1W2PRP0 233 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 DCTN6O00399 190 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 GMFGO60234 142 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 SPAG6O75602 509 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 GCAP28676 217 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 CD1BP29016 333 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 MAP3K8P41279 467 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 WNT4P56705 351 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 MESDQ14696 234 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 ARL6IP1Q15041 203 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 CFAP157Q5JU67 520 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 OR2G6Q5TZ20 316 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 SLC35F2Q8IXU6 374 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 C6orf223Q8N319 242 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 C20orf203Q8NBC4 194 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 STEAP2Q8NFT2 490 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 TMEM101Q96IK0 257 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 SECISBP2Q96T21 854 aaKnown RBP3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 NARFLQ9H6Q4 476 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms