RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 CDK5R1Q15078 307 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 AGERQ15109 404 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 C2orf68Q2NKX9 166 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 CXorf40AQ8TE69 158 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 MOAP1Q96BY2 351 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 PEX11GQ96HA9 241 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 OR14A2Q96R54 314 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 NRTNQ99748 197 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 PRSS27Q9BQR3 290 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 OR2AG1Q9H205 316 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 HAO2Q9NYQ3 351 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 TCF20Q9UGU0 1960 aaKnown RBP15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 A0A1W2PQ45 241 aaPredicted RBP15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 A0A1W2PQY0 241 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 INHAP05111 366 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 VSIG10L2P0DP72 767 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 CLUP10909 449 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 MAKP20794 623 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 DCTDP32321 178 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 CD96P40200 585 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 ZNF750Q32MQ0 723 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 ARSIQ5FYB1 569 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 OR7E24Q6IFN5 339 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 SLC36A1Q7Z2H8 476 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 LURAP1LQ8IV03 231 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 DNAAF1Q8NEP3 725 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 OR5AR1Q8NGP9 310 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 PXYLP1Q8TE99 480 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 HERVK_113Q902F9 699 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 C12orf57Q99622 126 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 GFI1Q99684 422 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 SAGE1Q9NXZ1 904 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 TAS2R10Q9NYW0 307 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 ASF1AQ9Y294 204 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 FCMRO60667 390 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 PRAMEF2O60811 474 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 ERAL1O75616 437 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 CKMP06732 381 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 ELFN1P0C7U0 828 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 RECQLP46063 649 aaPredicted RBP15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 P2RX1P51575 399 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 PPP2CBP62714 309 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 PPP2CAP67775 309 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 MRPS10P82664 201 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 LHX8Q68G74 356 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 ZNF793Q6ZN11 406 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 ZNF547Q8IVP9 402 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 CCDC116Q8IYX3 515 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 RFLNBQ8N5W9 214 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 SLC2A12Q8TD20 617 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 CNRIP1Q96F85 164 aaPredicted RBP15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 GINS4Q9BRT9 223 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 BARX1Q9HBU1 254 aaPredicted RBP15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 NDRG3Q9UGV2 375 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 MRTO4Q9UKD2 239 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 IFITM5A6NNB3 132 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 H7BY64 318 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 PYCARD-AS1I3L0S3 204 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 CDC123O75794 336 aaPredicted RBP15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 SPDEFO95238 335 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 ERGP11308 486 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 ZNF35P13682 527 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 RPA2P15927 270 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 OC90Q02509 493 aaPredicted RBP15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 FAM46CQ5VWP2 391 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 THSD4Q6ZMP0 1018 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 SERPINA12Q8IW75 414 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 PELI1Q96FA3 418 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 PAWRQ96IZ0 340 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 PRAP1Q96NZ9 151 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 PLCL2Q9UPR0 1127 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 FOXJ3Q9UPW0 622 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 SLC35A3Q9Y2D2 325 aa15.79■□□□□ 0.12
SQSTM1-211ENST00000506690 C17orf113A0A1B0GUU1 675 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 A0A1B0GW55 424 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 F5H5P2 479 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 GNRH1P01148 92 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 DUX4L2P0CJ85 424 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 DUX4L3P0CJ86 424 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 DUX4L4P0CJ87 422 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 DUX4L5P0CJ88 424 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 DUX4L6P0CJ89 424 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 DUX4L7P0CJ90 424 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 RPL35P42766 123 aaKnown RBP15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 SSR2P43308 183 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 PRR5P85299 388 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 MC2RQ01718 297 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 TP53I3Q53FA7 332 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 HES5Q5TA89 166 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 UNQ9370/PRO34162Q6UXP9 181 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 FCRLAQ7L513 359 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 NPAS4Q8IUM7 802 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 NRSN1Q8IZ57 195 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 RELL2Q8NC24 303 aaPredicted RBP15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 CAMKVQ8NCB2 501 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 VN1R2Q8NFZ6 395 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 MYLIPQ8WY64 445 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 LINC00615Q96LM1 132 aaPredicted RBP15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 AICDAQ9GZX7 198 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 OR52A5Q9H2C5 316 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms