RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 HCFC1P51610 2035 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 MED12LQ86YW9 2145 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 MSTNO14793 375 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 ZNF208O43345 1280 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 DNPH1O43598 174 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 SS18L1O75177 396 aaPredicted RBP14.94□□□□□ -0.02
SNCA-209ENST00000506244 GKN3PP0CG01 181 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 COX4I1P13073 169 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 TACR3P29371 465 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 AGFG1P52594 562 aaKnown RBP14.94□□□□□ -0.02
SNCA-209ENST00000506244 GYS2P54840 703 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 PCBP3P57721 371 aaKnown RBP14.94□□□□□ -0.02
SNCA-209ENST00000506244 SIRPAP78324 504 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 SORDQ00796 357 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 ERICH5Q6P6B1 374 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 FCRLAQ7L513 359 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 PATL1Q86TB9 770 aaKnown RBP14.94□□□□□ -0.02
SNCA-209ENST00000506244 DMRTC2Q8IXT2 367 aaPredicted RBP14.94□□□□□ -0.02
SNCA-209ENST00000506244 ZZZ3Q8IYH5 903 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 CLIP4Q8N3C7 705 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 CADM2Q8N3J6 435 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 OR6K3Q8NGY3 331 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 RASSF5Q8WWW0 418 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 ZNF524Q96C55 264 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 RCN3Q96D15 328 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 CMTM5Q96DZ9 223 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 TRIM8Q9BZR9 551 aa14.94□□□□□ -0.02
SNCA-209ENST00000506244 TMED7-TICAM2A0A0A6YYA0 188 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 SULT2B1O00204 365 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 SMNDC1O75940 238 aaKnown RBP eCLIP14.93□□□□□ -0.02
SNCA-209ENST00000506244 CD8BP10966 210 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 ENPP1P22413 925 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 CXCR1P25024 350 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 ACAA2P42765 397 aaKnown RBP14.93□□□□□ -0.02
SNCA-209ENST00000506244 DIO1P49895 249 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 GUSBP1Q15486 140 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 VMACQ2NL98 169 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 RABL3Q5HYI8 236 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 TMPPEQ6ZT21 453 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 LUZP2Q86TE4 346 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 ADGRG3Q86Y34 549 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 POU5F2Q8N7G0 328 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 RBM24Q9BX46 236 aaKnown RBP14.93□□□□□ -0.02
SNCA-209ENST00000506244 SRXN1Q9BYN0 137 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 FANCFQ9NPI8 374 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 KLHL9Q9P2J3 617 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 RPS6KB2Q9UBS0 482 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 TESQ9UGI8 421 aaKnown RBP14.93□□□□□ -0.02
SNCA-209ENST00000506244 OSGIN1Q9UJX0 560 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 PROCRQ9UNN8 238 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 TMED7Q9Y3B3 224 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 CHST2Q9Y4C5 530 aa14.93□□□□□ -0.02
SNCA-209ENST00000506244 A0A1W2PNR3 127 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 PMS2P2O95744 297 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 PRDX6P30041 224 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 CPOXP36551 454 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 KIR2DL2P43627 348 aaPredicted RBP14.92□□□□□ -0.02
SNCA-209ENST00000506244 RGS8P57771 180 aaPredicted RBP14.92□□□□□ -0.02
SNCA-209ENST00000506244 MYBPHQ13203 477 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 TMEM201Q5SNT2 666 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 VWA1Q6PCB0 445 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 RANBP3LQ86VV4 465 aaPredicted RBP14.92□□□□□ -0.02
SNCA-209ENST00000506244 STARD4Q96DR4 205 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 ADAM19Q9H013 955 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 MYLK2Q9H1R3 596 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 EFCAB1Q9HAE3 211 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 KLHL13Q9P2N7 655 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 KCNN3Q9UGI6 736 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 ARL2BPQ9Y2Y0 163 aa14.92□□□□□ -0.02
SNCA-209ENST00000506244 PKDREJQ9NTG1 2253 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 A8MXE2 369 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 FAM220BPB1ANY3 271 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 NDUFAB1O14561 156 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 AIM2O14862 343 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 DCTN3O75935 186 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 PRKD3O94806 890 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 MFN2O95140 757 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 FESP07332 822 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 C8BP07358 591 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 PRG2P13727 222 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 SSTR2P30874 369 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 PCYT1AP49585 367 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 VEZF1Q14119 521 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 HACD2Q6Y1H2 254 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 STK32CQ86UX6 486 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 CALHM3Q86XJ0 350 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 SLC26A7Q8TE54 656 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 ABHD3Q8WU67 409 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 ROBO4Q8WZ75 1007 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 C14orf79Q96F83 325 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 HOPXQ9BPY8 73 aaPredicted RBP14.91□□□□□ -0.02
SNCA-209ENST00000506244 ZNF559Q9BR84 538 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 TRIM2Q9C040 744 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 C12orf10Q9HB07 376 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 GALNT8Q9NY28 637 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 SELENONQ9NZV5 590 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 EMC3Q9P0I2 261 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 TMEM181Q9P2C4 612 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 TRAPPC4Q9Y296 219 aa14.91□□□□□ -0.02
SNCA-209ENST00000506244 ANKHD1Q8IWZ3 2542 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms