RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 LSMEM1Q8N8F7 131 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 SLC25A43Q8WUT9 341 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 RASSF5Q8WWW0 418 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 C3orf49Q96BT1 292 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 INTS12Q96CB8 462 aaKnown RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 NSL1Q96IY1 281 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 ARL5BQ96KC2 179 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 ZFP3Q96NJ6 502 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 OR5B2Q96R09 309 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 ARHGDIGQ99819 225 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 SRXN1Q9BYN0 137 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 EVA1AQ9H8M9 152 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 RNF122Q9H9V4 155 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 SPAG4Q9NPE6 437 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 ZNF629Q9UEG4 869 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 PLEKHB1Q9UF11 243 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 MCTS1Q9ULC4 181 aaKnown RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 KLF2Q9Y5W3 355 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 SPIN1Q9Y657 262 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 DOPEY2Q9Y3R5 2298 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 DOPEY1Q5JWR5 2465 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 NKX2-6A6NCS4 301 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 FAM90A27PA6NNH2 459 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 TMEM229AB2RXF0 380 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 M0R3H8 397 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 ZNF208O43345 1280 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 TMIGD3P0DMS9 266 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-208ENST00000494334 T-ENOLP0DO92 83 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 TFPIP10646 304 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 BMP5P22003 454 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 CXCR1P25024 350 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 CLK1P49759 484 aaKnown RBP12.13□□□□□ -0.47
COL1A1-208ENST00000494334 MAP2K6P52564 334 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 RGS8P57771 180 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-208ENST00000494334 RAC3P60763 192 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 NRF1Q16656 503 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 PPP4R4Q6NUP7 873 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 ATG4DQ86TL0 474 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-208ENST00000494334 GCNT2Q8N0V5 402 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 OR52E4Q8NGH9 312 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 OR4D11Q8NGI4 311 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 OR6T1Q8NGN1 323 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 ROBO4Q8WZ75 1007 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 CPNE4Q96A23 557 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-208ENST00000494334 KCTD14Q9BQ13 255 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-208ENST00000494334 PRRG4Q9BZD6 226 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 OR11A1Q9GZK7 315 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 TIGARQ9NQ88 270 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 ADA2Q9NZK5 511 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 TESQ9UGI8 421 aaKnown RBP12.13□□□□□ -0.47
COL1A1-208ENST00000494334 PACSIN3Q9UKS6 424 aa12.13□□□□□ -0.47
COL1A1-208ENST00000494334 LRRK2Q5S007 2527 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 A0A1B0GWA3 101 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 ZC3H12DA2A288 527 aaKnown RBP12.12□□□□□ -0.47
COL1A1-208ENST00000494334 B2RBV5 119 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 PRSS44E7EML9 344 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 CXCR6O00574 342 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 DVL2O14641 736 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 SYNGR4O95473 234 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 IL18BPO95998 194 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 IFNA14P01570 189 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 ENPP1P22413 925 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 HTR1EP28566 365 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 GRNP28799 593 aaKnown RBP12.12□□□□□ -0.47
COL1A1-208ENST00000494334 OPRM1P35372 400 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 DIO1P49895 249 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 MNAT1P51948 309 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 BNIP2Q12982 314 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 OR1Q1Q15612 314 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 NPTX1Q15818 432 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 ZNF239Q16600 458 aaKnown RBP12.12□□□□□ -0.47
COL1A1-208ENST00000494334 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
COL1A1-208ENST00000494334 OR2A2Q6IF42 318 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 C16orf89Q6UX73 402 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 RBM45Q8IUH3 476 aaKnown RBP12.12□□□□□ -0.47
COL1A1-208ENST00000494334 RNF148Q8N7C7 305 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 RELL2Q8NC24 303 aaPredicted RBP12.12□□□□□ -0.47
COL1A1-208ENST00000494334 VANGL1Q8TAA9 524 aaPredicted RBP12.12□□□□□ -0.47
COL1A1-208ENST00000494334 DDIT4LQ96D03 193 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 DNAJA3Q96EY1 480 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 CDRT15Q96T59 188 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 ZNF559Q9BR84 538 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 TRIM2Q9C040 744 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 TMEM27Q9HBJ8 222 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 KCNJ16Q9NPI9 418 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 RPS6KB2Q9UBS0 482 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 HDGFL3Q9Y3E1 203 aa12.12□□□□□ -0.47
COL1A1-208ENST00000494334 ICE1Q9Y2F5 2266 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 ARHGAP21Q5T5U3 1957 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 IGHV3-15A0A0B4J1V0 119 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 A0A1W2PNV4 684 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 C19orf84I3L1E1 186 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 SULT2B1O00204 365 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 GSTA4O15217 222 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 TNFSF13O75888 250 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 PMS2P2O95744 297 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 CRHP06850 196 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 IMPDH2P12268 514 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 FCGR2AP12318 317 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 CALB2P22676 271 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms