RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GTF2IRD2Q86UP8 949 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 RANBP3LQ86VV4 465 aaPredicted RBP12.53□□□□□ -0.4
CCM2-217ENST00000492883 MCEMP1Q8IX19 187 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 GCNT2Q8N0V5 402 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 PGAM4Q8N0Y7 254 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 GPR32P1Q8NGA4 272 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 RNF217Q8TC41 542 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 ROBO4Q8WZ75 1007 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 PROX1Q92786 737 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 CPNE4Q96A23 557 aaPredicted RBP12.53□□□□□ -0.4
CCM2-217ENST00000492883 DDIT4LQ96D03 193 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 ZNF559Q9BR84 538 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 PRR14Q9BWN1 585 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 TRIM2Q9C040 744 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 OR11A1Q9GZK7 315 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 SELENONQ9NZV5 590 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 TMEM181Q9P2C4 612 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 GMPR2Q9P2T1 348 aaKnown RBP12.53□□□□□ -0.4
CCM2-217ENST00000492883 PLEKHB1Q9UF11 243 aaPredicted RBP12.53□□□□□ -0.4
CCM2-217ENST00000492883 BAG5Q9UL15 447 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 KLF2Q9Y5W3 355 aaPredicted RBP12.53□□□□□ -0.4
CCM2-217ENST00000492883 B2RBV5 119 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 M0R3H8 397 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 SULT2B1O00204 365 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 CXCR6O00574 342 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 ZNF208O43345 1280 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 GMNNO75496 209 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 AQP8O94778 261 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 PLGP00747 810 aaPredicted RBP12.52□□□□□ -0.41
CCM2-217ENST00000492883 CD247P20963 164 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 CALB2P22676 271 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 DIO1P49895 249 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 RAC3P60763 192 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 CSNK2A1P68400 391 aaPredicted RBP12.52□□□□□ -0.41
CCM2-217ENST00000492883 FOXF2Q12947 444 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 OR1Q1Q15612 314 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 CYBRD1Q53TN4 286 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 EEF1A1P5Q5VTE0 462 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 TRPM8Q7Z2W7 1104 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 LSMEM1Q8N8F7 131 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 VANGL1Q8TAA9 524 aaPredicted RBP12.52□□□□□ -0.41
CCM2-217ENST00000492883 DNAJA3Q96EY1 480 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 ARL5BQ96KC2 179 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 MCHR1Q99705 422 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 ARHGDIGQ99819 225 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 WFDC6Q9BQY6 131 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 SRXN1Q9BYN0 137 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 COQ10BQ9H8M1 238 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 RNF122Q9H9V4 155 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 ABCD2Q9UBJ2 740 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 TESQ9UGI8 421 aaKnown RBP12.52□□□□□ -0.41
CCM2-217ENST00000492883 SLC9A8Q9Y2E8 581 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 SH3GLB1Q9Y371 365 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 HDGFL3Q9Y3E1 203 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 NBASA2RRP1 2371 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 SVILO95425 2214 aa12.52□□□□□ -0.41
CCM2-217ENST00000492883 POLEQ07864 2286 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 A0A1B0GWA3 101 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 NKX2-6A6NCS4 301 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 ELOA3DA6NLF2 546 aaPredicted RBP12.51□□□□□ -0.41
CCM2-217ENST00000492883 IL18BPO95998 194 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 CRHP06850 196 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 ENPP1P22413 925 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 HTR2AP28223 471 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 CRYBA2P53672 197 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 OR2B6P58173 313 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 BNIP2Q12982 314 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 MYBPHQ13203 477 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 ZNF239Q16600 458 aaKnown RBP12.51□□□□□ -0.41
CCM2-217ENST00000492883 NRF1Q16656 503 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 SLC25A35Q3KQZ1 300 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 ELOA3BQ3SY89 546 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 ALG10BQ5I7T1 473 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 ULK3Q6PHR2 472 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 DEFB107AQ8IZN7 70 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 RNF148Q8N7C7 305 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 CNEP1R1Q8N9A8 125 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 ELOA3Q8NG57 546 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 OR6T1Q8NGN1 323 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
CCM2-217ENST00000492883 LZICQ8WZA0 190 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 FAM162AQ96A26 154 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 C3orf49Q96BT1 292 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 TPD52L3Q96J77 140 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 CDRT15Q96T59 188 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 SFXN3Q9BWM7 321 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 CHST11Q9NPF2 352 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 ADPRHL2Q9NX46 363 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 PACSIN3Q9UKS6 424 aa12.51□□□□□ -0.41
CCM2-217ENST00000492883 ZGRF1Q86YA3 2104 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 IGHV3-15A0A0B4J1V0 119 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 A0A1W2PNV4 684 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 A8MVM7 634 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 EEF1E1-BLOC1S5C9J1V9 151 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 EEF1E1O43324 174 aaKnown RBP12.5□□□□□ -0.41
CCM2-217ENST00000492883 TPST2O60704 377 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 PRKD3O94806 890 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 PNMTP11086 282 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 NCK1P16333 377 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 TCN1P20061 433 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms