RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 BCAS1O75363 584 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 UFL1O94874 794 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 NDUFB10O96000 172 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 JCHAINP01591 159 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 DBTP11182 482 aaKnown RBP3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 H2AFXP16104 143 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 MX1P20591 662 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 PSMB1P20618 241 aaKnown RBP3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 HNF1AP20823 631 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 CPN2P22792 545 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 NMT1P30419 496 aaKnown RBP3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 DRD3P35462 400 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 GNPDA1P46926 289 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 SLC11A1P49279 550 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 ACADVLP49748 655 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 RGS19P49795 217 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 PPT1P50897 306 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 STX17P56962 302 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 MAP3K7CLP57077 242 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 FUT7Q11130 342 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 KLHL40Q2TBA0 621 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 TEX44Q53QW1 395 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 C9orf129Q5T035 196 aaKnown RBP3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 LIN9Q5TKA1 542 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 PDPK2PQ6A1A2 396 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZSCAN25Q6NSZ9 544 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 NIPAL3Q6P499 406 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 SLC39A4Q6P5W5 647 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 TFAP2EQ6VUC0 442 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 TRPM8Q7Z2W7 1104 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 PAQR7Q86WK9 346 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 IFNEQ86WN2 208 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 C9orf40Q8IXQ3 194 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 KATNAL2Q8IYT4 538 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZNF683Q8IZ20 524 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 SYCE1Q8N0S2 351 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 LRRC75A-AS1Q8N1F1 130 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 OSTF1Q92882 214 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 EMG1Q92979 244 aaKnown RBP3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 MCHR2Q969V1 340 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 FAM122AQ96E09 287 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 ARL5BQ96KC2 179 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 NPY6RQ99463 290 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 LZTS2Q9BRK4 669 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 GSDMCQ9BYG8 508 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 ASB8Q9H765 288 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 SGK2Q9HBY8 427 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 KLHL28Q9NXS3 571 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 EIF3LQ9Y262 564 aaKnown RBP3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 IFT52Q9Y366 437 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZFP92A6NM28 416 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 PPIAL4DF5H284 164 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 WWP2O00308 870 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 ARPC3O15145 178 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 TM9SF1O15321 606 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 AKR7A2O43488 359 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 TM7SF2O76062 418 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 S100A6P06703 90 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 UQCRBP14927 111 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 PRKACAP17612 351 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZP3P21754 424 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 U2AF2P26368 475 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 ANXA13P27216 316 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 CDH5P33151 784 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 LIPEQ05469 1076 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 BCL2L1Q07817 233 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 CCDC173Q0VFZ6 552 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 EXOSC2Q13868 293 aaKnown RBP3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 TFDP1Q14186 410 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 KCNJ11Q14654 390 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 NKAIN1Q4KMZ8 207 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 DCST2Q5T1A1 773 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 AP1ARQ63HQ0 302 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 LRRC66Q68CR7 880 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZNF57Q68EA5 555 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 WASH2PQ6VEQ5 465 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 Q6ZPB1 254 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 EIF3MQ7L2H7 374 aaKnown RBP3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 LUZP2Q86TE4 346 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 MYOCDQ8IZQ8 938 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 BPIFB2Q8N4F0 458 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 ANKFN1Q8N957 763 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 ADAMTS16Q8TE57 1224 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 TSEN15Q8WW01 171 aaKnown RBP3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 C17orf50Q8WW18 174 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 TMIGD2Q96BF3 282 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 HAVCR1Q96D42 359 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 SDSLQ96GA7 329 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 MSANTD3Q96H12 275 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 CATSPER2Q96P56 530 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 CCNL2Q96S94 520 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 BPIFA3Q9BQP9 254 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 C19orf24Q9BVV8 132 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 MRPL37Q9BZE1 423 aaKnown RBP3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 AUNIPQ9H7T9 357 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 CALHM2Q9HA72 323 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 CYP3A43Q9HB55 503 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 PARVGQ9HBI0 331 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 ABCB10Q9NRK6 738 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 PNO1Q9NRX1 252 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms