RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 MAP2K6P52564 334 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 OC90Q02509 493 aaPredicted RBP12.85□□□□□ -0.35
VPS26A-205ENST00000489656 PDK3Q15120 406 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 PLPPR5Q32ZL2 321 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 ZNF691Q5VV52 312 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 TIGD3Q6B0B8 471 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 OR5M10Q6IEU7 315 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 IGFL2Q6UWQ7 119 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 C5orf46Q6UWT4 87 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 OR4K17Q8NGC6 315 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 LIPHQ8WWY8 451 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 BPIFA2Q96DR5 249 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 C1GALT1C1Q96EU7 318 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 CNBD2Q96M20 576 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 ZNF552Q9H707 407 aaPredicted RBP12.85□□□□□ -0.35
VPS26A-205ENST00000489656 C20orf141Q9NUB4 165 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 MED17Q9NVC6 651 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 TMED7-TICAM2A0A0A6YYA0 188 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 OR5H15A6NDH6 313 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 ENO4A6NNW6 628 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 ZAR1LA6NP61 321 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 FAM47E-STBD1D6RA91 191 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 MAKP20794 623 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 CNR1P21554 472 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 CHMP24386 653 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 GPR4P46093 362 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 SLC9A3P48764 834 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 EGR4Q05215 589 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 RPL13AP3Q6NVV1 102 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 ARSKQ6UWY0 536 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 ZNF620Q6ZNG0 422 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 ADGRG3Q86Y34 549 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 KIF18BQ86Y91 864 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 C8orf59Q8N0T1 100 aaPredicted RBP12.84□□□□□ -0.35
VPS26A-205ENST00000489656 SLC43A2Q8N370 569 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 MDS2Q8NDY4 140 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 SETD9Q8NE22 299 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 OR1J4Q8NGS1 313 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 STK35Q8TDR2 534 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 HAS2Q92819 552 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 ZBTB8AQ96BR9 441 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 NPDC1Q9NQX5 325 aaPredicted RBP12.84□□□□□ -0.35
VPS26A-205ENST00000489656 ANKRD10Q9NXR5 420 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 IL20Q9NYY1 176 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 UBAP1Q9NZ09 502 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 FBXL2Q9UKC9 423 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 TMED7Q9Y3B3 224 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 GMPPBQ9Y5P6 360 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 ZFHX4Q86UP3 3567 aa12.84□□□□□ -0.35
VPS26A-205ENST00000489656 UNC119BA6NIH7 251 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 EFCAB9A8MZ26 197 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 KPNA4O00629 521 aaPredicted RBP12.83□□□□□ -0.36
VPS26A-205ENST00000489656 CDC42EP2O14613 210 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 GNB5O14775 395 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF208O43345 1280 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 GMFGO60234 142 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 NPIPB7O75200 414 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 SLC25A12O75746 678 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 CBR3O75828 277 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 ADRB1P08588 477 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 GGT2P36268 569 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 PLA2G5P39877 138 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 EIF1P41567 113 aaKnown RBP12.83□□□□□ -0.36
VPS26A-205ENST00000489656 ID4P47928 161 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 MASP1P48740 699 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 DSCR4P56555 118 aaPredicted RBP12.83□□□□□ -0.36
VPS26A-205ENST00000489656 NUP107P57740 925 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 CRYZQ08257 329 aaKnown RBP12.83□□□□□ -0.36
VPS26A-205ENST00000489656 PTGES3Q15185 160 aaKnown RBP12.83□□□□□ -0.36
VPS26A-205ENST00000489656 OR1C1Q15619 314 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 INPP5JQ15735 1006 aaPredicted RBP12.83□□□□□ -0.36
VPS26A-205ENST00000489656 DEFB109BQ30KR1 87 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 GLYR1Q49A26 553 aaPredicted RBP12.83□□□□□ -0.36
VPS26A-205ENST00000489656 SLX4IPQ5VYV7 408 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 UGT2A3Q6UWM9 527 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 LINC00696Q6ZRV3 163 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 THAP5Q7Z6K1 395 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 OR6S1Q8NH40 331 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 FBLIM1Q8WUP2 373 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 FAM122AQ96E09 287 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 SGTBQ96EQ0 304 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 DTNBP1Q96EV8 351 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 MUS81Q96NY9 551 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 SIGLEC12Q96PQ1 595 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 APOL4Q9BPW4 351 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 SLC25A19Q9HC21 320 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 PNPLA3Q9NST1 481 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 MRPS18CQ9Y3D5 142 aaKnown RBP12.83□□□□□ -0.36
VPS26A-205ENST00000489656 KCNMB2Q9Y691 235 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 CDH10Q9Y6N8 788 aa12.83□□□□□ -0.36
VPS26A-205ENST00000489656 TRAV36DV7A0A075B6V5 113 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 A0A0G2JMM0 328 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 A0A1W2PPB8 328 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 A0A1W2PRS3 328 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 TMEM72A0PK05 275 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 LRRC3CA6NJW4 275 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 A8MVM7 634 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 KIR3DP1A8MWS1 328 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 SUSD5O60279 629 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 FZD7O75084 574 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms