RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 CLCA3PQ9Y6N3 262 aa11.16□□□□□ -0.62
HDAC6-230ENST00000488543 IDSB3KWA1 339 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 LOC110117498-PIK3R3F6TDL0 507 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 CCRL2O00421 344 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 ONECUT2O95948 504 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 HBQ1P09105 142 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 GSTM3P21266 225 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 TNFSF8P32971 234 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 IFNGR2P38484 337 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 CDK5Q00535 292 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 SPANXN2Q5MJ10 180 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 C6orf183Q5T699 404 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 LIPKQ5VXJ0 399 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 BPHLQ86WA6 291 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-230ENST00000488543 NRMQ8IXM6 262 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 UBE2J2Q8N2K1 259 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 ZNF614Q8N883 585 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 OR8D4Q8NGM9 314 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 OR14A16Q8NHC5 309 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 CEP19Q96LK0 163 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 EGLN3Q9H6Z9 239 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 SMURF1Q9HCE7 757 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 CPNE5Q9HCH3 593 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 TVP23BQ9NYZ1 205 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 TBC1D24Q9ULP9 559 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 PSMD4P55036 377 aaKnown RBP11.15□□□□□ -0.62
HDAC6-230ENST00000488543 SNRPGP62308 76 aaKnown RBP11.15□□□□□ -0.62
HDAC6-230ENST00000488543 IFITM2Q01629 132 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 PRKCDQ05655 676 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 RASSF6Q6ZTQ3 369 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 NRARPQ7Z6K4 114 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 C9orf40Q8IXQ3 194 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 C7orf57Q8NEG2 295 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 MR1Q95460 341 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 TXNDC15Q96J42 360 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 DMRTB1Q96MA1 342 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 ZNF559Q9BR84 538 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 STRADBQ9C0K7 418 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 SLC25A19Q9HC21 320 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 TIGARQ9NQ88 270 aa11.15□□□□□ -0.62
HDAC6-230ENST00000488543 AKAP7Q9P0M2 348 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-230ENST00000488543 FRG2CA6NGY1 282 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 B4E171 279 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 TFECO14948 347 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 DYRK3O43781 588 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 PRKYO43930 277 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 IL33O95760 270 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 JMJD7P0C870 316 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 FPR3P25089 353 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 TSPAN7P41732 249 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 GPR4P46093 362 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 PCYT1AP49585 367 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 COPZ1P61923 177 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF91Q05481 1191 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 GINS1Q14691 196 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 EBPQ15125 230 aaKnown RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 BAK1Q16611 211 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 NDUFAF6Q330K2 333 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 KLHL26Q53HC5 615 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 C3orf38Q5JPI3 329 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 TMEM201Q5SNT2 666 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 DCAF12Q5T6F0 453 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 FNDC7Q5VTL7 733 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 ACSM5Q6NUN0 579 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 CCDC190Q86UF4 302 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 FGF11Q92914 225 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 EFHD2Q96C19 240 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 C8orf44Q96CB5 159 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 LCORQ96JN0 433 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 SPSB2Q99619 263 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 TAPBPLQ9BX59 468 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 HOXD1Q9GZZ0 328 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 C14orf105Q9NVL8 296 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 PCDHGA1Q9Y5H4 931 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 HEATR5AQ86XA9 2040 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 A0A0B4J2E0 115 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 A0A1B0GX12 115 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 ISPDA4D126 451 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 EFCAB10A6NFE3 127 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 SERINC4A6NH21 518 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 VSTM2BA6NLU5 285 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 C9orf172C9J069 976 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 PLD2O14939 933 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 MPZL2O60487 215 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 STK17BO94768 372 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 KLK3P07288 261 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 HEXBP07686 556 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 FTH1P19P0C7X4 201 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 CD79BP40259 229 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 GIPRP48546 466 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 GPR143P51810 404 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 CAV3P56539 151 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF45Q02386 682 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 RSBN1Q5VWQ0 802 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 MRPL14Q6P1L8 145 aaKnown RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF613Q6PF04 617 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 TIPARPQ7Z3E1 657 aaKnown RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 MRGPREQ86SM8 312 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 CMIPQ8IY22 773 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 ZFP41Q8N8Y5 198 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms