RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, human

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-213	ENST00000485962	MFSD12	Q6NUT3	480 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	CDC73	Q6P1J9	531 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	LRRC25	Q8N386	305 aa	Predicted RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	MS4A4E	Q96PG1	132 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	TIMM29	Q9BSF4	260 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	ZNF416	Q9BWM5	594 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	ESRP2	Q9H6T0	727 aa	Known RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	SESN1	Q9Y6P5	492 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	CENPVL1	A0A0U1RR11	272 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	NARS	O43776	548 aa	Known RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	REM1	O75628	298 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	MRPL3	P09001	348 aa	Known RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	ACSM1	Q08AH1	577 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	DPPA2	Q7Z7J5	298 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	GID4	Q8IVV7	300 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	DNAJC5G	Q8N7S2	189 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	MFSD9	Q8NBP5	474 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	ASB16	Q96NS5	453 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	CD180	Q99467	661 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	OR51V1	Q9H2C8	321 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	C11orf49	Q9H6J7	331 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	GALNT9	Q9HCQ5	603 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	KLHL1	Q9NR64	748 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	ACOXL	Q9NUZ1	547 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	BABAM2	Q9NXR7	383 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	EIF3K	Q9UBQ5	218 aa	Known RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	UNC119B	A6NIH7	251 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	BTN3A3	O00478	584 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	KAT7	O95251	611 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	CEACAM5	P06731	702 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	GZMK	P49863	264 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	SIM1	P81133	766 aa	Predicted RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	ID2	Q02363	134 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	SMAD2	Q15796	467 aa	Known RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	BTBD16	Q32M84	506 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	TMEM99	Q8N816	258 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	PFN4	Q8NHR9	129 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	ZFAND1	Q8TCF1	268 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	ADAMTS14	Q8WXS8	1223 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	SMARCD2	Q92925	531 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	TRIM36	Q9NQ86	728 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	PCDHB16	Q9NRJ7	776 aa		11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	LYAR	Q9NX58	379 aa	Known RBP	11.43	□□□□□ -0.58
SGSM3-213	ENST00000485962	EFCAB7	A8K855	629 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	KLF4	O43474	513 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	PTBP1	P26599	531 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	SHC1	P29353	583 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	RRAS2	P62070	204 aa	Predicted RBP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	HSF2	Q03933	536 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	RGS1	Q08116	209 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	SSX2	Q16385	188 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	RPE65	Q16518	533 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	DUSP5	Q16690	384 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	FAM27D1	Q5T7N8	215 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	NIPAL3	Q6P499	406 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	NR2C2AP	Q86WQ0	139 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	SAMD12	Q8N8I0	201 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	KDF1	Q8NAX2	398 aa	Predicted RBP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	LCN9	Q8WX39	176 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	ARSG	Q96EG1	525 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	ZNF578	Q96N58	590 aa	Predicted RBP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	MARVELD1	Q9BSK0	173 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	ADAP2	Q9NPF8	381 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	HPF1	Q9NWY4	346 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	NPIPA5	A0A0B4J1W7	369 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	NPIPA7	E9PJI5	369 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	SGK494	L7N484	410 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	GPR37	O15354	613 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	PRICKLE3	O43900	615 aa	Predicted RBP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	TRIM3	O75382	744 aa	Predicted RBP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	SLC43A1	O75387	559 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	ZGLP1	P0C6A0	271 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	NPIPA8	P0DM63	369 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	MAB21L1	Q13394	359 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	PRPF38B	Q5VTL8	546 aa	Known RBP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	TIGD3	Q6B0B8	471 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	MEPCE	Q7L2J0	689 aa	Known RBP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	OR14C36	Q8NHC7	312 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	ACOT12	Q8WYK0	555 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	ST8SIA4	Q92187	359 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	FGF13	Q92913	245 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	KCNJ15	Q99712	375 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	WDR77	Q9BQA1	342 aa	Predicted RBP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	IFT27	Q9BW83	186 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	HCAR1	Q9BXC0	346 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	C1QTNF2	Q9BXJ5	285 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	CRISPLD2	Q9H0B8	497 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	SIDT1	Q9NXL6	827 aa	Known RBP	11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	ZNF224	Q9NZL3	707 aa		11.42	□□□□□ -0.58
SGSM3-213	ENST00000485962	C1QB	P02746	253 aa		11.41	□□□□□ -0.58
SGSM3-213	ENST00000485962	FAM157B	P0CG42	384 aa		11.41	□□□□□ -0.58
SGSM3-213	ENST00000485962	RD3L	P0DJH9	198 aa		11.41	□□□□□ -0.58
SGSM3-213	ENST00000485962	SAG	P10523	405 aa	Predicted RBP	11.41	□□□□□ -0.58
SGSM3-213	ENST00000485962	F8A1	P23610	371 aa		11.41	□□□□□ -0.58
SGSM3-213	ENST00000485962	NOS3	P29474	1203 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms