RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 AQP1P29972 269 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 SLC7A1P30825 629 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 CARD18P57730 90 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 DMTNQ08495 405 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 FOXF2Q12947 444 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 ARMC8Q8IUR7 673 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 SLC15A3Q8IY34 581 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 LSMEM1Q8N8F7 131 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 OSTF1Q92882 214 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 LRRC37BQ96QE4 947 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 SPOCK3Q9BQ16 436 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 SRXN1Q9BYN0 137 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 UCK2Q9BZX2 261 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 ABCD2Q9UBJ2 740 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 TESQ9UGI8 421 aaKnown RBP14.23□□□□□ -0.13
UPF3A-208ENST00000484246 FOXD3Q9UJU5 478 aaPredicted RBP14.23□□□□□ -0.13
UPF3A-208ENST00000484246 ICE1Q9Y2F5 2266 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 TMED7-TICAM2A0A0A6YYA0 188 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 C19orf84I3L1E1 186 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 AIM2O14862 343 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 TPST1O60507 370 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 FMO6PO60774 539 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 PMS2P2O95744 297 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 KCNJ5P48544 419 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 CRYBA2P53672 197 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 COPZ1P61923 177 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 GKAP1Q5VSY0 366 aaPredicted RBP14.22□□□□□ -0.13
UPF3A-208ENST00000484246 PLXDC2Q6UX71 529 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 TMPPEQ6ZT21 453 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 GCNT2Q8N0V5 402 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 RASSF5Q8WWW0 418 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 TAMM41Q96BW9 452 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 INTS12Q96CB8 462 aaKnown RBP14.22□□□□□ -0.13
UPF3A-208ENST00000484246 GMPPAQ96IJ6 420 aaPredicted RBP14.22□□□□□ -0.13
UPF3A-208ENST00000484246 ARHGDIGQ99819 225 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 CMTM6Q9NX76 183 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 KLHL28Q9NXS3 571 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 PACSIN3Q9UKS6 424 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 TMED7Q9Y3B3 224 aa14.22□□□□□ -0.13
UPF3A-208ENST00000484246 NKX2-6A6NCS4 301 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 TMEM229AB2RXF0 380 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 M0QX08 132 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 MSTNO14793 375 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 FZD7O75084 574 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 LGI1O95970 557 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 OPN1LWP04000 364 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 CD8BP10966 210 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 HOXB1P14653 301 aaPredicted RBP14.21□□□□□ -0.13
UPF3A-208ENST00000484246 CD247P20963 164 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 PEX19P40855 299 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 KIR2DL2P43627 348 aaPredicted RBP14.21□□□□□ -0.13
UPF3A-208ENST00000484246 NUDT2P50583 147 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 CSNK2A1P68400 391 aaPredicted RBP14.21□□□□□ -0.13
UPF3A-208ENST00000484246 RNPS1Q15287 305 aaKnown RBP14.21□□□□□ -0.13
UPF3A-208ENST00000484246 NRF1Q16656 503 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 GLIPR1L2Q4G1C9 344 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 FAM214BQ7L5A3 538 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 ATG4DQ86TL0 474 aaPredicted RBP14.21□□□□□ -0.13
UPF3A-208ENST00000484246 SLC43A2Q8N370 569 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 OR2T12Q8NG77 320 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 GPR32P1Q8NGA4 272 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 RNASE6Q93091 150 aaKnown RBP14.21□□□□□ -0.13
UPF3A-208ENST00000484246 C3orf49Q96BT1 292 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 OR5B2Q96R09 309 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 TACO1Q9BSH4 297 aaKnown RBP14.21□□□□□ -0.13
UPF3A-208ENST00000484246 POTEKPQ9BYX7 375 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 TRIM2Q9C040 744 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 SLC13A4Q9UKG4 626 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 ADAM21Q9UKJ8 722 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 TRAPPC4Q9Y296 219 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 FREM3P0C091 2139 aa14.21□□□□□ -0.13
UPF3A-208ENST00000484246 A0A1W2PNR3 127 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 TMEM72A0PK05 275 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 NME4O00746 187 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 HNRNPRO43390 633 aaKnown RBP14.2□□□□□ -0.14
UPF3A-208ENST00000484246 FRS3O43559 492 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 NPIPB7O75200 414 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 CGAP01215 116 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 COL8A1P27658 744 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 HTR2AP28223 471 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 DIO1P49895 249 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 SLC7A2P52569 658 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 AGFG1P52594 562 aaKnown RBP14.2□□□□□ -0.14
UPF3A-208ENST00000484246 RGS8P57771 180 aaPredicted RBP14.2□□□□□ -0.14
UPF3A-208ENST00000484246 MYBPHQ13203 477 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 DUSP7Q16829 419 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 SWT1Q5T5J6 900 aaKnown RBP14.2□□□□□ -0.14
UPF3A-208ENST00000484246 SP5Q6BEB4 398 aaPredicted RBP14.2□□□□□ -0.14
UPF3A-208ENST00000484246 GTF2IRD2BQ6EKJ0 949 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 ABLIM2Q6H8Q1 611 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 GTF2IRD2Q86UP8 949 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 MICU2Q8IYU8 434 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 ATP6V1C2Q8NEY4 427 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 OR6K3Q8NGY3 331 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 DDIT4LQ96D03 193 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 STARD4Q96DR4 205 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 LRRC46Q96FV0 321 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 ARL5BQ96KC2 179 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 ZNF559Q9BR84 538 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 PRRG4Q9BZD6 226 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms