RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 OR5B2Q96R09 309 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 SLC35A5Q9BS91 424 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 RBM4Q9BWF3 364 aaKnown RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 BBS2Q9BXC9 721 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 NDEL1Q9GZM8 345 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 MFFQ9GZY8 342 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 IL25Q9H293 177 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 UGT1A10Q9HAW8 530 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 ZC4H2Q9NQZ6 224 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 MYEF2Q9P2K5 600 aaKnown RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 COPS3Q9UNS2 423 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 ATP6V1DQ9Y5K8 247 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 USP16Q9Y5T5 823 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 MYH14Q7Z406 1995 aaKnown RBP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 TRAV6A0A075B6T7 132 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 GOLGA8QA0A0J9YX86 632 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 IQANK1A0A1B0GTG1 560 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 RNF212BA8MTL3 300 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 CHST1O43916 411 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 PFKFB2O60825 505 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 ZBTB11O95625 1053 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 NUDT14O95848 222 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF12P17014 697 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 UGT1A4P22310 534 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 FCGR2CP31995 323 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 SLC1A1P43005 524 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 CRYBA2P53672 197 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 XGP55808 180 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 TMEM50BP56557 158 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 LRRC63Q05C16 580 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 TMEM187Q14656 261 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 LAGE3Q14657 143 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 NCF4Q15080 339 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 C18orf21Q32NC0 220 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 TECRLQ5HYJ1 363 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF790Q6PG37 636 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 CERS6Q6ZMG9 384 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 STAC2Q6ZMT1 411 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 NIPA1Q7RTP0 329 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 ARHGAP18Q8N392 663 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 MTURNQ8N3F0 131 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 BPIFB2Q8N4F0 458 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 OR52I1Q8NGK6 324 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 PLPPR1Q8TBJ4 325 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 DNAJA3Q96EY1 480 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 C9orf72Q96LT7 481 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF317Q96PQ6 595 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 XPO6Q96QU8 1125 aaKnown RBP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 FAM173AQ9BQD7 235 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 SYT11Q9BT88 431 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 CABLES2Q9BTV7 478 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 FRMD8P1Q9BZ68 369 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 PRRG3Q9BZD7 231 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 OR2AG1Q9H205 316 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 RHBGQ9H310 441 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 GAREM1Q9H706 876 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 ELL3Q9HB65 397 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 TMEM165Q9HC07 324 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 ESM1Q9NQ30 184 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 IL20Q9NYY1 176 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 LNPEPQ9UIQ6 1025 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 TMCO1Q9UM00 188 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 FAF1Q9UNN5 650 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-214ENST00000483925 RNF24Q9Y225 148 aa3.78□□□□□ -1.8
PTCD3-214ENST00000483925 SBNO1A3KN83 1393 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 TRBV9A0A0B4J1U6 114 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 SRRM3A6NNA2 597 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-214ENST00000483925 RAB29O14966 203 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 CALUO43852 315 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-214ENST00000483925 TYROBPO43914 113 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 AIREO43918 545 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 CXCL13O43927 109 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 OR10H3O60404 316 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 SH3BGRLO75368 114 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 HSBP1O75506 76 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 CCNB2O95067 398 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 TSHBP01222 138 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 ANXA5P08758 320 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 CT62P0C5K7 136 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 GATA1P15976 413 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-214ENST00000483925 POLR2EP19388 210 aaKnown RBP3.77□□□□□ -1.81
PTCD3-214ENST00000483925 BCKDHBP21953 392 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 OXTRP30559 389 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 FOXN2P32314 431 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 OPRD1P41143 372 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 SLC1A2P43004 574 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 CRATP43155 626 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 HLCSP50747 726 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 ARHGDIAP52565 204 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 BLVRAP53004 296 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 ZNF85Q03923 595 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 ARL16Q0P5N6 197 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 FASTKQ14296 549 aaKnown RBP3.77□□□□□ -1.81
PTCD3-214ENST00000483925 ECSCRQ19T08 205 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 SLC22A6Q4U2R8 563 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 EIPR1Q53HC9 387 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 GPRIN3Q6ZVF9 776 aa3.77□□□□□ -1.81
PTCD3-214ENST00000483925 FRA10AC1Q70Z53 315 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms