RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 RIMS3Q9UJD0 308 aa17.99■□□□□ 0.47
TRAPPC12-220ENST00000482645 A0A1B0GVC2 190 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 FAAHO00519 579 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 CLOCKO15516 846 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 SEC14L5O43304 696 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 TPOP07202 933 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 RHCEP18577 417 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 TACR3P29371 465 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 SLC1A3P43003 542 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 CDH12P55289 794 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 SRYQ05066 204 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 RBPJQ06330 500 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 MRPL49Q13405 166 aaKnown RBP17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 PIN1Q13526 163 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 TMEM44Q2T9K0 475 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 PHF10Q8WUB8 498 aaKnown RBP17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 SARAFQ96BY9 339 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 ZNF559Q9BR84 538 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 TMEM27Q9HBJ8 222 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 ALKBH4Q9NXW9 302 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 VNN3Q9NY84 501 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 C6orf203Q9P0P8 240 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 DNAJB9Q9UBS3 223 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 A4GNTQ9UNA3 340 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 ZNF462Q96JM2 2506 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 C7orf72A4D263 438 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 FFAR1O14842 300 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 ACTL6AO96019 429 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 CHMP24386 653 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 CRYZQ08257 329 aaKnown RBP17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 OR1Q1Q15612 314 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 CHERPQ8IWX8 916 aaKnown RBP17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 ADAMTS16Q8TE57 1224 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 TIMP4Q99727 224 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 TRIM2Q9C040 744 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 REEP1Q9H902 201 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 SH3BGRL2Q9UJC5 107 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 CAMK2AQ9UQM7 478 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 U3KQV3 271 aa17.98■□□□□ 0.47
TRAPPC12-220ENST00000482645 GTF3C1Q12789 2109 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 ADAMDEC1O15204 470 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 FMO6PO60774 539 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 SLC19A2O60779 497 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 E2F6O75461 281 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 PRSS23O95084 383 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 ADH6P28332 368 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 SFTPDP35247 375 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 POLR2HP52434 150 aaKnown RBP17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 PPP1R8Q12972 351 aaKnown RBP17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 SLC25A53Q5H9E4 307 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 VASNQ6EMK4 673 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 ZNF605Q86T29 641 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 OFCC1Q8IZS5 231 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 ICA1LQ8NDH6 482 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 OR52J3Q8NH60 311 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 FNDC11Q9BVV2 318 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 SELENONQ9NZV5 590 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 OSGIN1Q9UJX0 560 aa17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 SAMHD1Q9Y3Z3 626 aaKnown RBP17.97■□□□□ 0.47
TRAPPC12-220ENST00000482645 A0A1B0GWA3 101 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 OR14I1A6ND48 311 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 PYCARD-AS1I3L0S3 204 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 ETV2O00321 342 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 NTN1O95631 604 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 FUT4P22083 530 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 ELK4P28324 431 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 APOBEC1P41238 236 aaKnown RBP17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 HTR3AP46098 478 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 LHX2P50458 406 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 IST1P53990 364 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 SLC34A1Q06495 639 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 SELENBP1Q13228 472 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 NHSL2Q5HYW2 709 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 ALG10BQ5I7T1 473 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 FGD3Q5JSP0 725 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 WLSQ5T9L3 541 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 C3orf33Q6P1S2 294 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 CD163Q86VB7 1156 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 ATCAYQ86WG3 371 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 LSMEM1Q8N8F7 131 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 C3orf49Q96BT1 292 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 DNAJA3Q96EY1 480 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 SLC41A3Q96GZ6 507 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 BDH2Q9BUT1 245 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 SERINC1Q9NRX5 453 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 PNPLA3Q9NST1 481 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 SLC7A7Q9UM01 511 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 RELNP78509 3460 aa17.96■□□□□ 0.47
TRAPPC12-220ENST00000482645 TMED7-TICAM2A0A0A6YYA0 188 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 TRAPPC13A5PLN9 417 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 SAC3D1A6NKF1 404 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 H0YC42 278 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 LINC01387J3KSC0 135 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 BCKDKO14874 412 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 EFNA2O43921 213 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 OR5F1O95221 314 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 GADD45GO95257 159 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 H1F0P07305 194 aaKnown RBP17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 PTNP21246 168 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms