RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TAB1Q15750 504 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 MAPK11Q15759 364 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 SFRP5Q5T4F7 317 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 SLC2A7Q6PXP3 512 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 ZNF836Q6ZNA1 936 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 C20orf204Q6ZNR8 217 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 LRRC74BQ6ZQY2 392 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 BHLHA15Q7RTS1 189 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-212ENST00000482251 ZNF100Q8IYN0 542 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 MIER2Q8N344 545 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 STEAP2Q8NFT2 490 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 AKAP1Q92667 903 aaKnown RBP eCLIP9.28□□□□□ -0.92
CPSF4-212ENST00000482251 NEUROG1Q92886 237 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 PIGTQ969N2 578 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 Q96MF0 132 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 EBF4Q9BQW3 602 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 EXOSC3Q9NQT5 275 aaKnown RBP9.28□□□□□ -0.92
CPSF4-212ENST00000482251 SDR39U1Q9NRG7 319 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-212ENST00000482251 ZIM2Q9NZV7 527 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 LIPT1Q9Y234 373 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 TMED7Q9Y3B3 224 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 MAP1AP78559 2803 aaPredicted RBP9.27□□□□□ -0.92
CPSF4-212ENST00000482251 DSCAMO60469 2012 aa9.27□□□□□ -0.92
CPSF4-212ENST00000482251 ZC3H12DA2A288 527 aaKnown RBP9.27□□□□□ -0.93
CPSF4-212ENST00000482251 TRIM64A6NGJ6 449 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 TRIM64BA6NI03 449 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 NR5A2O00482 541 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 KLF11O14901 512 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 RAD51DO75771 328 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 GUSBP08236 651 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 NUDT7P0C024 238 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 IGHV1-2P23083 117 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 TACR3P29371 465 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 ADSLP30566 484 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-212ENST00000482251 DSTNP60981 165 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 STX1BP61266 288 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 LRRC74AQ0VAA2 488 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 EPS8Q12929 822 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 ITGADQ13349 1161 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 GSTA3Q16772 222 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 LIN52Q52LA3 116 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 TTMPQ5BVD1 217 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 AGBL2Q5U5Z8 902 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 ADAM5Q6NVV9 412 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 Q6ZT83 130 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 YTHDF3Q7Z739 585 aaKnown RBP9.27□□□□□ -0.93
CPSF4-212ENST00000482251 GALNT5Q7Z7M9 940 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 ADGRG3Q86Y34 549 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 CCDC103Q8IW40 242 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 PEX5LQ8IYB4 626 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 UBE2J2Q8N2K1 259 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 CIARTQ8N365 385 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-212ENST00000482251 CADM2Q8N3J6 435 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 KBTBD8Q8NFY9 601 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 OR52P1PQ8NH57 321 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 LRRC8CQ8TDW0 803 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 OIT3Q8WWZ8 545 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 ZHX1-C8orf76Q96EF9 292 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 TMEM19Q96HH6 336 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 ITCHQ96J02 903 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 POTEKPQ9BYX7 375 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 RMND5AQ9H871 391 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 TPT1P8Q9HAU6 139 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 GP6Q9HCN6 339 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 EMC3Q9P0I2 261 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 OSGIN1Q9UJX0 560 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 ZNF443Q9Y2A4 671 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-212ENST00000482251 NOSIPQ9Y314 301 aaKnown RBP9.27□□□□□ -0.93
CPSF4-212ENST00000482251 RNF115Q9Y4L5 304 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 NAV3Q8IVL0 2385 aa9.27□□□□□ -0.93
CPSF4-212ENST00000482251 A0A1W2PR80 420 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 CFAP73A6NFT4 308 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 ZNF716A6NP11 495 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 ZNF724A8MTY0 619 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 H7C1Q1 480 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 HS3ST1O14792 307 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 SMAD7O15105 426 aaKnown RBP9.26□□□□□ -0.93
CPSF4-212ENST00000482251 POLR3GO15318 223 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-212ENST00000482251 ARHGEF9O43307 516 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 FRS3O43559 492 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 PMS2P2O95744 297 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 DBIP07108 87 aaKnown RBP9.26□□□□□ -0.93
CPSF4-212ENST00000482251 IMPDH2P12268 514 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 PRG2P13727 222 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 PTH2RP49190 550 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 POLR2HP52434 150 aaKnown RBP9.26□□□□□ -0.93
CPSF4-212ENST00000482251 CRISP3P54108 245 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 BSPH1Q075Z2 132 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 BNIP2Q12982 314 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 GNA13Q14344 377 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 KRTAP21-3Q3LHN1 58 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 C9orf135Q5VTT2 229 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 SHEQ5VZ18 495 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 EPGNQ6UW88 154 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 SEZ6L2Q6UXD5 910 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 CASP12Q6UXS9 341 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 MTDHQ86UE4 582 aaKnown RBP9.26□□□□□ -0.93
CPSF4-212ENST00000482251 CMIPQ8IY22 773 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 PIGXQ8TBF5 258 aa9.26□□□□□ -0.93
CPSF4-212ENST00000482251 SLC38A5Q8WUX1 472 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms